Detail information of GWHGAAEX004931/evm.TU.scaffold_156.65


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|430741175|ref|YP_007200304.1|1.00E-73short-chain alcohol dehydrogenase [Singulisphaera acidiphila DSM 18658]
KOGKOG07254.00E-118Reductases with broad range of substrate specificities
nrgi|743816017|ref|XP_010930522.1|1.35E-134PREDICTED: NADPH-dependent pterin aldehyde reductase [Elaeis guineensis]
Swissprottr|Q9SY73|PTALR_ARATH1.00E-118NADPH-dependent pterin aldehyde reductase {ECO:0000303|PubMed:17550420}
trEMBLtr|M0TUM8|M0TUM8_MUSAM7.00E-124Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P29250_001}
TAIRAT1G103104.00E-118NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016019554921971482-
Transcript Sequence

Network for GWHGAAEX004931

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00106.24adh_short72036.80E-44
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.480
SRR2545915Juvenile tuber22.130
SRP108465SRR5643513five period of Gastrodia elata30.130
SRR5643514five period of Gastrodia elata26.740
SRR5643515five period of Gastrodia elata29.020
SRR5643524five period of Gastrodia elata28.320
SRR5643525five period of Gastrodia elata36.970
SRR5643528five period of Gastrodia elata36.020
SRR5643658five period of Gastrodia elata37.000
SRR5643659five period of Gastrodia elata24.980
SRR5643660five period of Gastrodia elata28.080
SRR5643661five period of Gastrodia elata25.680
SRR5643662five period of Gastrodia elata27.430
SRR5643663five period of Gastrodia elata26.140
SRR5643664five period of Gastrodia elata28.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.070
SRR6049655Rhizomagastrodiae_C368-T10_good_137.260
SRR6049656Rhizomagastrodiae_C368-T07_good_128.490
SRR6049657Rhizomagastrodiae_C368-T07_good_131.950
SRR6049658Rhizomagastrodiae_C368-T04_good_129.090
SRR6049659Rhizomagastrodiae_C368-T04_good_133.360
SRR6049660Rhizomagastrodiae_C368-T01_good_131.950
SRR6049661Rhizomagastrodiae_C368-T04_good_127.640
SRR6049662Rhizomagastrodiae_C368-T01_good_124.930
SRR6049663Rhizomagastrodiae_C368-T01_good_126.240
SRR6049664Rhizomagastrodiae_C368-T10_good_132.030
SRR6049665Rhizomagastrodiae_C368-T10_good_132.030
SRP279888GastroGastrodia elata tuber 28.67
JuvenJuvenile tuber22.15
Mother_GastroMother tuber of Gastrodia elata 28.06
Mother_JuvenMother tuber of Juvenile 29.14