Detail information of GWHGAAEX004932/evm.TU.scaffold_156.67
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|218781433|ref|YP_002432751.1| | 7.00E-35 | serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01] |
| KOG | KOG0583 | 0 | Serine/threonine protein kinase |
| nr | gi|720061126|ref|XP_010275070.1| | 0 | PREDICTED: CBL-interacting serine/threonine-protein kinase 23-like isoform X1 [Nelumbo nucifera] |
| Swissprot | tr|Q6ZLP5|CIPKN_ORYSJ | 0 | CBL-interacting protein kinase 23 |
| trEMBL | tr|J3MIL3|J3MIL3_ORYBR | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:OB07G12450.1} |
| TAIR | AT1G30270 | 0 | CBL-interacting protein kinase 23 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000160 | 1979891 | 2056178 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004932
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 12 | 267 | 4.80E-71 |
| PF03822.13 | NAF | 308 | 368 | 6.30E-20 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CAMK_CAMKL-CHK1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0007165 | Biological Process | signal transduction |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.890 |
| SRR2545915 | Juvenile tuber | 9.160 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 19.890 |
| SRR5643514 | five period of Gastrodia elata | 19.730 | |
| SRR5643515 | five period of Gastrodia elata | 16.070 | |
| SRR5643524 | five period of Gastrodia elata | 17.920 | |
| SRR5643525 | five period of Gastrodia elata | 8.000 | |
| SRR5643528 | five period of Gastrodia elata | 7.900 | |
| SRR5643658 | five period of Gastrodia elata | 5.980 | |
| SRR5643659 | five period of Gastrodia elata | 29.820 | |
| SRR5643660 | five period of Gastrodia elata | 29.470 | |
| SRR5643661 | five period of Gastrodia elata | 28.990 | |
| SRR5643662 | five period of Gastrodia elata | 20.160 | |
| SRR5643663 | five period of Gastrodia elata | 25.570 | |
| SRR5643664 | five period of Gastrodia elata | 16.870 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 34.540 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 54.930 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 45.870 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 47.140 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 26.360 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 25.420 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 47.940 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 37.480 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 38.800 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 28.190 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 30.390 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 30.390 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 20.14 |
| Juven | Juvenile tuber | 68.28 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.60 | |
| Mother_Juven | Mother tuber of Juvenile | 23.50 |