Detail information of GWHGAAEX004934/evm.TU.scaffold_156.69
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2287 | 0 | Galactosyltransferases |
| nr | gi|743761031|ref|XP_010940183.1| | 0 | PREDICTED: probable beta-1,3-galactosyltransferase 20 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|A7XDQ9|B3GTK_ARATH | 0 | Probable beta-1,3-galactosyltransferase 20 |
| trEMBL | tr|A0A061GKH2|A0A061GKH2_THECC | 0 | Galactosyltransferase family protein isoform 1 {ECO:0000313|EMBL:EOY27579.1} |
| TAIR | AT4G21060 | 0 | Galactosyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000160 | 2094600 | 2100152 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004934
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00337.21 | Gal-bind_lectin | 194 | 401 | 3.20E-47 |
| PF01762.20 | Galactosyl_T | 449 | 631 | 3.20E-32 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006486 | Biological Process | protein glycosylation |
| GO:0030246 | Molecular Function | carbohydrate binding |
| GO:0008378 | Molecular Function | galactosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 30.890 |
| SRR2545915 | Juvenile tuber | 24.950 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 31.130 |
| SRR5643514 | five period of Gastrodia elata | 25.650 | |
| SRR5643515 | five period of Gastrodia elata | 25.860 | |
| SRR5643524 | five period of Gastrodia elata | 27.920 | |
| SRR5643525 | five period of Gastrodia elata | 24.390 | |
| SRR5643528 | five period of Gastrodia elata | 18.960 | |
| SRR5643658 | five period of Gastrodia elata | 20.640 | |
| SRR5643659 | five period of Gastrodia elata | 35.150 | |
| SRR5643660 | five period of Gastrodia elata | 39.960 | |
| SRR5643661 | five period of Gastrodia elata | 40.400 | |
| SRR5643662 | five period of Gastrodia elata | 38.260 | |
| SRR5643663 | five period of Gastrodia elata | 35.040 | |
| SRR5643664 | five period of Gastrodia elata | 38.500 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 38.370 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 37.720 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 36.440 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 46.010 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 64.770 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 85.020 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 52.290 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 57.780 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 40.200 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 50.850 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 30.410 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 30.410 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 44.02 |
| Juven | Juvenile tuber | 27.58 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 47.85 | |
| Mother_Juven | Mother tuber of Juvenile | 28.48 |