Gene detail

Detail information of GWHGAAEX004941/evm.TU.scaffold_156.81

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|15678002\|ref\|NP_274061.1\|	6.00E-12	dnaJ protein, truncation, partial [Neisseria meningitidis MC58]
KOG	KOG0720	1.00E-173	Molecular chaperone (DnaJ superfamily)
nr	gi\|672145706\|ref\|XP_008796780.1\|	0	PREDICTED: uncharacterized protein LOC103712133 isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q6XL73\|DNJ39_ARATH	6.00E-09	Chaperone protein dnaJ 39
trEMBL	tr\|M0TBS4\|M0TBS4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P31290_001}
TAIR	AT1G16680	1.00E-173	Chaperone DnaJ-domain superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000160	2420218	2440937	-

Transcript Sequence
>GWHTAAEX004941 ATGGGAGACATTGGGCTCTTCAGCCAAGGATGGAGGTGGTTTGAATTTCAGAAGCAGGCGTTTGTGGGAACCCAAATTGCATTGGGCTGCATAAGGGATTGGCTTATCTTTCTAGTGGATCGACATTGGCCAGTAGTATCAAGATGGAGCATGAATCTTGGGAATTTTTTGTTGAAGTTGATTTGGCTGTGGAGAGACTGTATTGTCAGGGGATTTGCAACACTGATCAGTCTTTGTTCGACAGCAGTGTTTGTGATTATATGGAGTTGCTTTCTTAGCCTGGCATCAACAGTTTGCCTTCTTTATGTTCTTTTGAGCCTGGGATCTGCTGGAGCCTCTATTTACTTTCTGGGTTACACCCCTGGACTCTTTGTGGTTGGTTTATTTGGCATTTTGATGCTGTGGAAATACAGTAACTTTTGGATTACAGGCATGTTGATCATAGTTGGAGGCTATGCGTTCTCTTTAAATCATGCACGAGTTCTTGTATTCATTTCAGCGGCGTATGCTTTGTACTTTGCCTATTCTCATGTTGGATGGGCTGGGATCTTCTTTTCTATAAATCTCTCCTTCATTTCAAATGATCTTCTAAACAAGTTACTCCAGGGATATGATTGTACTGGTGAAGGTTCAGGTTTTGAGGAACAGAAAGCATCTGAACCACCTGAAGAAGATTATGCTAGTGAATTTGAATTTTTTCATCAAACTGAGGCTAACAATGCAACTTCAAGTAAATCAGCTGTTAAAAATTCTGTTACATCAAATTTTTTAAATGTTCAGAAAGAAGCTTCTTCAAGCAAAGTTGTAAAAGCTGACTTAGCTTCAATTGATGAAATTAAGAGAATAATGAAGAGCTCAAATCATTATGAAGCCTTAGGATTCTCTCGAAGGAATAGTATTGATCCCATTGTGCTGAAAAAGGAATATCATAAAAAGGCCATGCTTGTGCATCCTGACAAAAATATGGGAAGGCCACTAGCAAGTGAGTCATTCAAGAAGCTGCAGTGCGCTTATGAGGTCCTTTCAGACTTTACAAAGAAGAAAAATTATGATGAGCAACTCAAGAAAGAAGAATCTGGTGGAGTGGCTCAACGGTCTTGCAGCTCCTCTAAACAGGATGGTGTAGACTTTCATTCAGAAGAGTCCAGGCGCATAGACTGCACAAAGTGTGGTAACTCACATATTTGGATTTGTGTCAAAAGAAATAAATCAAGTGCTCGATGGTGTCAGGATTGCTCTCAATATCACCAAGCTAAAGATGGCGATGGATGGGTGGAATATAGACTCTCTTCTATCTTTTCTACATCCCAAAAGGTTGAAATACCTCGGGCCTTTGTTTGTGCTGAGAGCAAGATATTTGACGTGTCTGAATGGGCTATTTGTCAGGGAGTGACATGCAAGCCCAACTCACACAGGCCGAGTTTCCACGTAAATATGGTGGGCTTAGATAATAAGTCGCCAGCCCAAAGATCCAATTCGTCCCGGTATCCTTGGGGCCTTGATGCAGAGATGGTGCCAGAAGATGACGAATTTGAACTCTGGCTTCAACAGGCATTGGCATCCGGACTCTTTTCTGACAGTCCTAAACGCAGGAAAAGCTGGAGCCCTTTCAAAATGCCTCAGAAAGGCATCAAACCGTGGCGGAGGTCCCCCTAA

Network for GWHGAAEX004941

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	287	351	1.10E-17
PF14901.5	Jiv90	382	478	5.90E-33

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	21.220
SRP064423	SRR2545915	Juvenile tuber	21.000
SRP108465	SRR5643513	five period of Gastrodia elata	15.780
	SRR5643514	five period of Gastrodia elata	15.320
	SRR5643515	five period of Gastrodia elata	13.430
	SRR5643524	five period of Gastrodia elata	15.240
	SRR5643525	five period of Gastrodia elata	20.060
	SRR5643528	five period of Gastrodia elata	21.580
	SRR5643658	five period of Gastrodia elata	17.990
	SRR5643659	five period of Gastrodia elata	11.990
	SRR5643660	five period of Gastrodia elata	13.000
	SRR5643661	five period of Gastrodia elata	12.940
	SRR5643662	five period of Gastrodia elata	14.510
	SRR5643663	five period of Gastrodia elata	14.650
	SRR5643664	five period of Gastrodia elata	14.330
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.730
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.960
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.750
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.980
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.070
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	19.970
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	16.830
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	17.390
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.790
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	15.390
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.300
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.300
SRP279888	Gastro	Gastrodia elata tuber	16.96
	Juven	Juvenile tuber	18.53
	Mother_Gastro	Mother tuber of Gastrodia elata	18.80
	Mother_Juven	Mother tuber of Juvenile	23.05