Detail information of GWHGAAEX004946/evm.TU.scaffold_157.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|661890848|emb|CDP05425.1|1.67E-30unnamed protein product [Coffea canephora]
Swissprottr|Q6NLW5|XRI1_ARATH6.00E-12Protein XRI1
trEMBLtr|A0A068UA46|A0A068UA46_COFCA6.00E-31Coffea canephora
TAIRAT2G019908.00E-26Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000153409607410884-
Transcript Sequence

Network for GWHGAAEX004946

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.720
SRR2545915Juvenile tuber18.530
SRP108465SRR5643513five period of Gastrodia elata1.440
SRR5643514five period of Gastrodia elata2.090
SRR5643515five period of Gastrodia elata3.470
SRR5643524five period of Gastrodia elata2.380
SRR5643525five period of Gastrodia elata0.420
SRR5643528five period of Gastrodia elata0.430
SRR5643658five period of Gastrodia elata1.940
SRR5643659five period of Gastrodia elata9.260
SRR5643660five period of Gastrodia elata6.710
SRR5643661five period of Gastrodia elata8.670
SRR5643662five period of Gastrodia elata12.170
SRR5643663five period of Gastrodia elata6.750
SRR5643664five period of Gastrodia elata2.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.700
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_13.240
SRR6049657Rhizomagastrodiae_C368-T07_good_12.440
SRR6049658Rhizomagastrodiae_C368-T04_good_11.450
SRR6049659Rhizomagastrodiae_C368-T04_good_11.110
SRR6049660Rhizomagastrodiae_C368-T01_good_11.900
SRR6049661Rhizomagastrodiae_C368-T04_good_12.030
SRR6049662Rhizomagastrodiae_C368-T01_good_15.840
SRR6049663Rhizomagastrodiae_C368-T01_good_13.800
SRR6049664Rhizomagastrodiae_C368-T10_good_11.370
SRR6049665Rhizomagastrodiae_C368-T10_good_11.370
SRP279888GastroGastrodia elata tuber 1.47
JuvenJuvenile tuber1.49
Mother_GastroMother tuber of Gastrodia elata 1.11
Mother_JuvenMother tuber of Juvenile 0.26