Gene detail

Detail information of GWHGAAEX004955/evm.TU.scaffold_157.20

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743817889\|ref\|XP_010931064.1\|	PREDICTED: digalactosyldiacylglycerol synthase 1, chloroplastic-like [Elaeis guineensis]
Swissprot	tr\|Q6DW74\|DGDG1_LOTJA	Digalactosyldiacylglycerol synthase 1, chloroplastic (Precursor)
trEMBL	tr\|F6H6T0\|F6H6T0_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB47916.1}
TAIR	AT3G11670	UDP-Glycosyltransferase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000153	1116004	1138171	+

Transcript Sequence
>GWHTAAEX004955 AAATAAAGTCTGTTGAGATTTTTTTTGTTCACGCCTCGTTTGCTCGCTCGTCCGTCTCTTTTCTAGTTTTTTTGTGGTCCATGCAAAAGTGCGATCAGTCGAGAGGCGCGAGCAGCAGGCGATTCCCTTAATTTTCTGTACCCATTGCCCCTGAATCCAATCCTCTGTTGTAACAATGATCAATCTCGGCATGGACACAAGGCCGTCGGCCTCTGTCACGGCGGAAAAGGCCATTTCCTTCATATCCAAGGGTTGGAAAGAGGTGCGAAACCACGCTGGCGCCGACCTCCAGTTGATGCGTGCTAGGGCCAATTCCATCATGAATCTCGCCGACCGTGAGCTAGAGAACTTCCTCCACTCGGCGTCCATCTTCTCCGTTCCTTCACAGTCTTCGATGGATAGCTCCCTAGAGCTCGAGTTTGTGAAACGATTTCAACCCAAATTGTCGGAATTTCGGCGGGCTTACTCGTCTCCTGATTTTAGCCGGATGATGCTGGAGAAGTGGGGACCTAGGTCGAGTATCCGGATTGACCTGTCCAGGATAAGGAATGCCATTGTATGGGAGGCCAATTACAGTGGAAGGACGTTGAATTTTGACAGTCATAGAGCTTCCTGGTGGAAGGAAAATGGCAGGGAGAAGGAGCATGAGTGGGAGCCATTTCAAAAACTCAAGGAAAGGCTTAAAGAATTTGAGCAGAAGACTCAGCCGAGCGACTTATTTTGGAGTTTCAAAAGTAACGAGTTGGTTGAGAAAGTGAAGTTGAGCTTGAAATCATTTTGCAAGGAGCCAGAAGAGTCCAAGGAAGTTTGCCCATTGGATCTACCAGAACTCTTGGCATACTTGGTTAAGCAATCCGTCCCTTTGTTTGATCAGCTTGGCATCCGGAGAGATATATGTGACAAAATTGTGGAGTCACTGTGCAGCAAGCAAAAAGCTCATCCACTATCAGACAGTACATCTGCAGAAGATGTATCTCTTTCAGAGCATCACAACTTCAGCAACGATCTAGATTTCCGAATTGCTAGTGTGCTGCAGAGCACTGGTCATCATTCTAATGGTGGTTATTGGAGTGACTATACAAATCTTGATGTTGATGACAAGAAACGCCATGTGGCGATTGTCACAACAGCCTGCCTCCCATGGATGACTGGAACGGCTGTAAACCCATTGTTCCGAGCTGCATATTTGGCAAAGTGTGCAAGGCAGAAAGTAACATTGGTGGTACCCTGGCTTTGCATGGCAGATCAGGTGCTAGTTTATCCTAACAGTTTAACATTTAGCACTCCAGAAGAGCAGGAATCTTACATTCGTAACTGGTTGGAGGAGAGAGTTGGCTTTAAAACAGATTTTAAGATCTCCTTTTATCCAGGAAAGTTTTCTAAAAAAAGACGAAGTATTATTCCTGCCGGAGACACTTCTGAATTCATACCTTCCAAGAAAGCTGATATTGCTATACTAGAAGAACCAGAGCACCTGAACTGGTACCATCATGGTAAACGTTGGACAGATAAGTTCAGCCATGTTATTGGCGTTGTCCACACGAATTACTTGGAATACATCAAAAGAGAGAAGAATGGCGCTATCCAAGCATTTTTGGTCAAGCATATTAACAATATGGTAACTCGTGCTTACTGCCACAAGGTTCTGAGACTTTCAGCAGCAACTCAGGACCTACCCAGATCCGTAGTTTGCAATGTTCACGGTGTGAATCCCAAGTTCCTCGAGGTTGGAGAGCGAATAGCAGCCGAGAGGGAGAGCGGGCGCCTGTCCTTTTCCAAAGGAGCATATTTCCTAGGCAAGATGATTTGGGCTAAAGGCTACAAAGAGCTAATATATCTGTTGGCAGAGAACAAGGATGAGTTACCAAGCTTCAATATAGACGTCTACGGAAACGGCGAAGACTCTCATGAAGTGCAGTCCACTGCCCAGAAACTTCAGCTTAATATACATTTTAAGAAAGGAAGGGATCATTCTGATGATTCGCTCCACGGGTACAAGGTATTTATAAATTCCAGCGTGAGCGATGTCCTATGCACGGCAACGGCGGAGGCTCTCGCGATGGGCAAATTTGTCATTTGTGCGGACCATCCTTCAAATGATTTCTTCAGAGCCTTCCCTAACTGCCTGACCTACAGAAACTCGAAGGAATTTGTCGCGAAGGTGAAACAGGCGCTAGCAAGCGACCCCCACCCCCTCACTGCCAGCCAGAGGTACAATCTATCCTGGGAGGCCGCCACCCAGAGATTCATTGAATTCTCCGAGCTCGACAGAGCCCTGAACGGAGACCTTGACGGAAAAATTAAGAGGTCAATCTCGATGCCGAGCTTGTCCGAATTGGTTGACGGGGGTTTGGCTTTTGCTCATTACTGCCTCACAGGGAATGAGCTCCTGAGACTCTCCACAGGAGCAATCCCCGGAACAAGGGACTATGATAAGCAGCATTGTGTTGATTTGCGGCTCCTGCCCCCTCAGGTGCAGCACCCCATATATGGTTGGTAGTCTCTCTTTGCAATAGAGTATCTCTGTATTGAGTTTACACTGCCAAACAATGGAATTATTTGTAAATATTATTTTTGATTCTACATTATTATTATATAGGTTCAGCATTATTTGAAAGAATATTTATATTGCACAGTATTAATTAGCATTGCCCAAGTCGAATGGTTCCAAGTTTTCTTCTT

Network for GWHGAAEX004955

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00534.19	Glycos_transf_1	538	640	3.90E-09

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT4

KEGG pathway

KO	Enzyme	pathway	mapID
K09480	DGD	Metabolic pathways	map01100
K09480	DGD	Glycerolipid metabolism	map00561

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.060
SRP064423	SRR2545915	Juvenile tuber	14.760
SRP108465	SRR5643513	five period of Gastrodia elata	18.190
	SRR5643514	five period of Gastrodia elata	20.390
	SRR5643515	five period of Gastrodia elata	17.470
	SRR5643524	five period of Gastrodia elata	18.630
	SRR5643525	five period of Gastrodia elata	15.260
	SRR5643528	five period of Gastrodia elata	17.040
	SRR5643658	five period of Gastrodia elata	21.270
	SRR5643659	five period of Gastrodia elata	28.560
	SRR5643660	five period of Gastrodia elata	30.190
	SRR5643661	five period of Gastrodia elata	30.190
	SRR5643662	five period of Gastrodia elata	39.090
	SRR5643663	five period of Gastrodia elata	37.490
	SRR5643664	five period of Gastrodia elata	39.800
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	15.630
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.370
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	16.610
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.140
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.380
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.840
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	14.560
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	17.950
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	17.510
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	21.860
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	21.860
SRP279888	Gastro	Gastrodia elata tuber	37.59
	Juven	Juvenile tuber	41.30
	Mother_Gastro	Mother tuber of Gastrodia elata	19.15
	Mother_Juven	Mother tuber of Juvenile	27.58