Detail information of GWHGAAEX004969/CADD00418.2.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00173.00E-40FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
nrgi|147842487|emb|CAN65222.1|1.05E-44hypothetical protein VITISV_038665 [Vitis vinifera]
Swissprottr|P10978|POLX_TOBAC7.00E-24Endonuclease
trEMBLtr|A5B4I5|A5B4I5_VITVI4.00E-45Putative uncharacterized protein {ECO:0000313|EMBL:CAN65222.1}
TAIRAT2G198403.00E-40transposable element gene

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000170189212197755+
Transcript Sequence

Network for GWHGAAEX004969

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07727.13RVT_2132214111.20E-16
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.520
SRR2545915Juvenile tuber0.290
SRP108465SRR5643513five period of Gastrodia elata0.660
SRR5643514five period of Gastrodia elata1.670
SRR5643515five period of Gastrodia elata1.590
SRR5643524five period of Gastrodia elata2.440
SRR5643525five period of Gastrodia elata0.710
SRR5643528five period of Gastrodia elata0.520
SRR5643658five period of Gastrodia elata0.710
SRR5643659five period of Gastrodia elata0.520
SRR5643660five period of Gastrodia elata0.630
SRR5643661five period of Gastrodia elata0.520
SRR5643662five period of Gastrodia elata0.420
SRR5643663five period of Gastrodia elata0.530
SRR5643664five period of Gastrodia elata0.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.620
SRR6049655Rhizomagastrodiae_C368-T10_good_10.390
SRR6049656Rhizomagastrodiae_C368-T07_good_10.520
SRR6049657Rhizomagastrodiae_C368-T07_good_10.430
SRR6049658Rhizomagastrodiae_C368-T04_good_10.010
SRR6049659Rhizomagastrodiae_C368-T04_good_10.010
SRR6049660Rhizomagastrodiae_C368-T01_good_10.110
SRR6049661Rhizomagastrodiae_C368-T04_good_10.060
SRR6049662Rhizomagastrodiae_C368-T01_good_10.070
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.390
SRR6049665Rhizomagastrodiae_C368-T10_good_10.390
SRP279888GastroGastrodia elata tuber 0.08
JuvenJuvenile tuber0.69
Mother_GastroMother tuber of Gastrodia elata 0.81
Mother_JuvenMother tuber of Juvenile 0.87