Detail information of GWHGAAEX004970/evm.TU.scaffold_158.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392375121|ref|YP_003206954.1|5.00E-24Caspase-1, p20 [Candidatus Methylomirabilis oxyfera]
KOGKOG15461.00E-180Metacaspase involved in regulation of apoptosis
nrgi|305387431|gb|ADM52185.1|0type II metacaspase [Hevea brasiliensis]
Swissprottr|O64518|MCA5_ARATH0Metacaspase-5
trEMBLtr|I6LM00|I6LM00_HEVBR0Type II metacaspase {ECO:0000313|EMBL:ADM52185.1}
TAIRAT1G793301.00E-180metacaspase 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000170201446203954+
Transcript Sequence

Network for GWHGAAEX004970

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00656.21Peptidase_C1434202.80E-76
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms683.080
SRR2545915Juvenile tuber534.430
SRP108465SRR5643513five period of Gastrodia elata213.880
SRR5643514five period of Gastrodia elata160.290
SRR5643515five period of Gastrodia elata156.990
SRR5643524five period of Gastrodia elata151.520
SRR5643525five period of Gastrodia elata159.860
SRR5643528five period of Gastrodia elata117.370
SRR5643658five period of Gastrodia elata229.240
SRR5643659five period of Gastrodia elata194.720
SRR5643660five period of Gastrodia elata264.440
SRR5643661five period of Gastrodia elata244.430
SRR5643662five period of Gastrodia elata282.470
SRR5643663five period of Gastrodia elata272.780
SRR5643664five period of Gastrodia elata461.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1510.480
SRR6049655Rhizomagastrodiae_C368-T10_good_1319.700
SRR6049656Rhizomagastrodiae_C368-T07_good_1383.910
SRR6049657Rhizomagastrodiae_C368-T07_good_1523.680
SRR6049658Rhizomagastrodiae_C368-T04_good_1479.360
SRR6049659Rhizomagastrodiae_C368-T04_good_1559.090
SRR6049660Rhizomagastrodiae_C368-T01_good_1461.430
SRR6049661Rhizomagastrodiae_C368-T04_good_1450.720
SRR6049662Rhizomagastrodiae_C368-T01_good_1293.570
SRR6049663Rhizomagastrodiae_C368-T01_good_1381.880
SRR6049664Rhizomagastrodiae_C368-T10_good_1289.820
SRR6049665Rhizomagastrodiae_C368-T10_good_1289.820
SRP279888GastroGastrodia elata tuber 270.57
JuvenJuvenile tuber267.50
Mother_GastroMother tuber of Gastrodia elata 149.51
Mother_JuvenMother tuber of Juvenile 178.21