Gene detail

Detail information of GWHGAAEX004974/evm.TU.scaffold_158.15

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|310824860\|ref\|YP_003957218.1\|	9.00E-11	alpha-1,2-mannosidase family protein [Stigmatella aurantiaca DW4/3-1]
KOG	KOG0909	0	Peptide:N-glycanase
nr	gi\|743793095\|ref\|XP_010923840.1\|	0	PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9FGY9\|PNG1_ARATH	0	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
trEMBL	tr\|M0SU82\|M0SU82_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P33200_001}
TAIR	AT5G49570	0	peptide-N-glycanase 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000170	256998	286119	+

Transcript Sequence
>GWHTAAEX004974 ATTAGTTCATTTAGGCCAATAATGCGGCCCGCAGGGAGATTGTATTGTTAAAAATCCAACACTGCAATCTACAAAAGCCTTTAATATTTTCAATCCTTTACACTCCTTACAAGGTTCAGATCGAGCATCCTAAAATCGCCGGCGACCATAAGTCGCTTCCAAGAAATTGGGGAAGAGAAGGCGCGAAAATGGTGACTCGAAGACTTGTTGTTCGCCATAACGGCATCGATCTACCCATCGATTACGACACCGACGACGGCTTGGAAGTTCTCAAGTTTCAGATATTCTCGCTTACCTCTGTTCCTCCCGAGGAGCAAAAGCTTCTGTCGGGAGATAGGAACATTGTTATCACAGAAGAATCTGATCTCTTGACCTTCTCGGAGAAGCTCCGCTTGATTTCATTCGAGGATGGATCAGAAGGCAAAGCAGAATCCAGCCAGCAAATGGTGCAATCCGACGAAGAATTGGCCCGAATGCTGCAGGCAGAAGAAGAAGCTCTATTCTTTCAACAATTCCAGGCCCGTGAAGATGGAAAGGAGTTTGAGCAGAGGGTTCGGCCTTATGTGGATCAGGTCCTACAGTACGAGGATTCTGTGCGACAAGAAGCTGCTCGCAAATCAGTTCCCATTGAAGAGCTTCAAGAGAAAGCTCTGGTTTCCTTGGCCAAGGAGGCCAACTTCAAACCTTCCAATGATGAGGAAGATCACGCTTTCTTGCTGCAACTGCTGTCGTGGTTTAAGCAATCATTCAGCTGGATTAACTCTCTCCCTTGCGATAATTGTGGACATGCAACTAGCAATATTGGTATGGGTGCTCCGTTTCCCACTGAAACTAAGTTTGGGGCCTCTCGTGTTGAACTTTACAGGTGTGGCTACTGTTCATGTATTACCCGTTTTCCTCGATTCAATGATCCTTTAAAGCTTCTGGAAACAAGAAAAGGTCGTTGTGGAGAGTGGGCAAATTGTTTTACTCTTTATTGTCGAGCTTTTGGCTATGAAACTCGACTGATATTGGACTTAACAGATCATGTGTGGACAGAATGTTTTTCACATTTCTTAGGAAGGTGGATGCACCTTGACCCATGCGAAGGCATATATGATAATCCATTGCTTTATGAGAAAGGCTGGAATAAAAAATTAAACTATGTCATTGGTATAACAAAAGATGGAGTATATGATGTTACTAAAAGATACACACGGAGGTGGTCTGAGGTCTTATCGAGACGCCGCATTACAACCGAAACCTCTGTATCCTTTGTTCTTTCTTCTTTAACAAAAGAATTACGTGCTGGATATACATCTAAAGAACTCGAGCTTCGAGACAAGATGGAATTAGAAGAATTAGAGAACGGGTTACTTAATATGACTGATTCTTCTGCGACCTTGCCTGGGAGGCAGAGTGGAGATGTTGAATGGCGAATGGCAAGGCATGAGCTGGGTTCAAATGAACAAAACTCTCTAAGCTGTTCTTCATGTCCTGTCCGAATATGTGTAGACGAGCATGTAACTAACATATATAATGCTTTTTCACTTCTTTCATCTTTTCGCCATGAAAATGCCATATCAACAGGTGAAGTACTTGCAGCTTTGAAAATGCTTAAAAGTTTGTTTGTGGATCTTAGAGCTGCTCCTTTTAAAATGCGAAAAGCATTTTTGAGCTCAGCATCAGTGCTTTCAGAGAAAGTTCTATTTTTCTTCAAAGCATTGTTGACAGCAGTTTACTTGAAGGATCAAACTGAGAGTGGTGAAAAAATATGCGTTTGTATAGCTAATGATCCAGTTAAAACTTCATTAGCTTTGCCCGTTGCTTTGGATGTAGTTGATGAATTAATTGAAAATTTGGATACTGAAGTTTATTGTGAGGAGGCAAGACAATTTCCCACTTCTAATAGAATGTCATCTGGTTTTGTTCTGGCTAGTGGTGAAGAACTCCCGTTTGGAATTGGCACTTCGGCATTTGATGGTTCTCGCAGGAGTAAATGGGAAGAACCAAATGGAGCAAAAAAAGGATGCTGGCTATTGTATAAAGTTGCTGATAACCAGAGACTCGATCTGGAGTCATATGAACTGATGTCGGCAAATGATGCTCCAGAAAGGGATCCGATGGAGTGGATTGTTGAGGGGAGCGATGACGGAGGGCAGAGCTGGATGGAGCTGGACAGGAGGAGCCGGCAGCTATTCGAGAGGCGTTTCCAGCGCAAAACATTCACAGTACAAAGGAGATTCCTTTCTAATGCATTCAGATTCCGATTTCTTTCGGTGAGGGATCCGAATTCAACTTCAAGATTTCAGATTGGCAGCATCGACCTCTTTTCTAATGCAAGCAGCTTTTAAGATTCTTTTGGGTTTTAGCTTTTGATCTGTAAATGAAAATTGTCCGAATTTTAATTGTGCTTATTTTCTAATGCAAGCAGCTATTTTTCATACTCTCTACCTGTCTAATGCGTATATGGATTTGCTAAATAAATACAGTAAATAATATATTCAGTTTTGTACTACTTTTTGCTATTTTTTATTAAAGTCAAAAATACAAAAAATTCAATATCAGTAGT

Network for GWHGAAEX004974

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03835.14	Rad4	280	385	8.20E-13

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01456	E3.5.1.52, NGLY1, PNG1	Protein processing in endoplasmic reticulum	map04141

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	21.620
SRP064423	SRR2545915	Juvenile tuber	29.370
SRP108465	SRR5643513	five period of Gastrodia elata	26.040
	SRR5643514	five period of Gastrodia elata	29.160
	SRR5643515	five period of Gastrodia elata	22.970
	SRR5643524	five period of Gastrodia elata	28.150
	SRR5643525	five period of Gastrodia elata	15.590
	SRR5643528	five period of Gastrodia elata	13.730
	SRR5643658	five period of Gastrodia elata	16.010
	SRR5643659	five period of Gastrodia elata	30.180
	SRR5643660	five period of Gastrodia elata	30.630
	SRR5643661	five period of Gastrodia elata	29.840
	SRR5643662	five period of Gastrodia elata	26.430
	SRR5643663	five period of Gastrodia elata	29.510
	SRR5643664	five period of Gastrodia elata	26.820
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	26.820
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	28.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	25.920
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.110
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.030
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.470
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	26.350
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	29.740
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.820
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	32.250
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	32.250
SRP279888	Gastro	Gastrodia elata tuber	33.24
	Juven	Juvenile tuber	28.08
	Mother_Gastro	Mother tuber of Gastrodia elata	25.95
	Mother_Juven	Mother tuber of Juvenile	24.35