Detail information of GWHGAAEX004982/evm.TU.scaffold_158.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|169831148|ref|YP_001717130.1|7.00E-10HAD family phosphatase [Candidatus Desulforudis audaxviator MP104C]
KOGKOG29617.00E-83Predicted hydrolase (HAD superfamily)
nrgi|743758833|ref|XP_010929037.1|1.83E-118PREDICTED: uncharacterized protein LOC105050638 isoform X1 [Elaeis guineensis]
trEMBLtr|M0U3B2|M0U3B2_MUSAM3.00E-102Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P25050_001}
TAIRAT3G588307.00E-83haloacid dehalogenase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000170625192635094+
Transcript Sequence

Network for GWHGAAEX004982

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09419.9PGP_phosphatase642121.90E-37
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01094GEP4 Metabolic pathways map01100
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.970
SRR2545915Juvenile tuber13.250
SRP108465SRR5643513five period of Gastrodia elata15.770
SRR5643514five period of Gastrodia elata17.360
SRR5643515five period of Gastrodia elata18.020
SRR5643524five period of Gastrodia elata17.340
SRR5643525five period of Gastrodia elata28.990
SRR5643528five period of Gastrodia elata27.800
SRR5643658five period of Gastrodia elata23.710
SRR5643659five period of Gastrodia elata21.190
SRR5643660five period of Gastrodia elata16.220
SRR5643661five period of Gastrodia elata25.060
SRR5643662five period of Gastrodia elata20.550
SRR5643663five period of Gastrodia elata19.460
SRR5643664five period of Gastrodia elata20.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.100
SRR6049655Rhizomagastrodiae_C368-T10_good_120.940
SRR6049656Rhizomagastrodiae_C368-T07_good_117.840
SRR6049657Rhizomagastrodiae_C368-T07_good_113.520
SRR6049658Rhizomagastrodiae_C368-T04_good_112.470
SRR6049659Rhizomagastrodiae_C368-T04_good_111.270
SRR6049660Rhizomagastrodiae_C368-T01_good_111.590
SRR6049661Rhizomagastrodiae_C368-T04_good_111.130
SRR6049662Rhizomagastrodiae_C368-T01_good_114.600
SRR6049663Rhizomagastrodiae_C368-T01_good_112.380
SRR6049664Rhizomagastrodiae_C368-T10_good_117.620
SRR6049665Rhizomagastrodiae_C368-T10_good_117.620
SRP279888GastroGastrodia elata tuber 17.95
JuvenJuvenile tuber21.04
Mother_GastroMother tuber of Gastrodia elata 33.25
Mother_JuvenMother tuber of Juvenile 26.36