Detail information of GWHGAAEX004985/evm.TU.scaffold_158.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|291615312|ref|YP_003525469.1|2.00E-60ribosomal protein L11 methyltransferase [Sideroxydans lithotrophicus ES-1]
nrgi|695057837|ref|XP_009417212.1|1.27E-126PREDICTED: uncharacterized protein LOC103997648 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TZG0|M0TZG0_MUSAM2.00E-121Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P11510_001}
TAIRAT5G539202.00E-93ribosomal protein L11 methyltransferase-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000170666876684139+
Transcript Sequence

Network for GWHGAAEX004985

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06325.12PrmA963771.00E-70
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006479Biological Processprotein methylation
GO:0008276Molecular Functionprotein methyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.110
SRR2545915Juvenile tuber12.780
SRP108465SRR5643513five period of Gastrodia elata23.650
SRR5643514five period of Gastrodia elata27.590
SRR5643515five period of Gastrodia elata23.400
SRR5643524five period of Gastrodia elata30.000
SRR5643525five period of Gastrodia elata18.410
SRR5643528five period of Gastrodia elata18.170
SRR5643658five period of Gastrodia elata33.820
SRR5643659five period of Gastrodia elata19.650
SRR5643660five period of Gastrodia elata23.690
SRR5643661five period of Gastrodia elata22.470
SRR5643662five period of Gastrodia elata20.520
SRR5643663five period of Gastrodia elata23.930
SRR5643664five period of Gastrodia elata24.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.740
SRR6049655Rhizomagastrodiae_C368-T10_good_127.420
SRR6049656Rhizomagastrodiae_C368-T07_good_114.730
SRR6049657Rhizomagastrodiae_C368-T07_good_114.940
SRR6049658Rhizomagastrodiae_C368-T04_good_115.730
SRR6049659Rhizomagastrodiae_C368-T04_good_112.170
SRR6049660Rhizomagastrodiae_C368-T01_good_116.170
SRR6049661Rhizomagastrodiae_C368-T04_good_113.370
SRR6049662Rhizomagastrodiae_C368-T01_good_124.740
SRR6049663Rhizomagastrodiae_C368-T01_good_120.530
SRR6049664Rhizomagastrodiae_C368-T10_good_122.100
SRR6049665Rhizomagastrodiae_C368-T10_good_122.100
SRP279888GastroGastrodia elata tuber 22.56
JuvenJuvenile tuber24.12
Mother_GastroMother tuber of Gastrodia elata 48.79
Mother_JuvenMother tuber of Juvenile 33.27