Gene detail

Detail information of GWHGAAEX004987/evm.TU.scaffold_158.29

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|543961862\|ref\|YP_008544897.1\|	6.00E-88	K+ transporter [Sulfuricella denitrificans skB26]
nr	gi\|743864202\|ref\|XP_010943975.1\|	0	PREDICTED: potassium transporter 7-like isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9FY75\|POT7_ARATH	0	Potassium transporter 7
trEMBL	tr\|W1PUK7\|W1PUK7_AMBTC	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}
TAIR	AT5G09400	0	K+ uptake permease 7

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000170	702140	724607	-

Transcript Sequence
>GWHTAAEX004987 GTTTTGGGAAATCCCCTTTACATCCTCTCGAATTCGCATTTCGTTCTAGCCGCGGTGCCATTTTACAACTCATAAATATATTATTTGATTCCTTGGCTTTGTTTGAATCCCAAGCTGTTCGAATCGATAAATCATACGATTTTTATGTTTGCCATGTATTTCTGGATTCAATGACGCTTTTTATTGTTGCTTTCATGGAACTCTTCTCATGCACGCGTATTACAGTGATTTAAAGGCAATTTAATTAAACCTGAATCGAATGGCAGAGAGTTCGGAGTGTGCGGATGGTGGCTTGGTGAATATGGATTCGACCGAATCTAGATGGGTTTTTCAGGAGGAGGACGATTCTGAGGAGGCTAGGGCACAAAGTGGCTATGAGTCGGTGGAAGAGGAAACTGGTGAGCAAAGATTGGTAAGGACCGGCCCCAGAATTGATTCTTTTGATGTTGAGGCTCTCGAGGTCCCGGGTGCACAGAATCATGATTACGAGGACTTTAATCTGTGTCGGAGCCTTATACTTGTTTTTCAGACTCTTGGTGTTGTGTTTGGGGATGTTGGAACGAGTCCGCTGTACACTTTTGATATTATGTTTAATAGATATCCCATTTCTGAGAAGGAGGATGTTCTTGGAGCACTTTCTCTTGTTCTTTACACGTTGATCTTGATACCACTGGTGAAGTACACTTTGATAGTTCTCCGGGGTAATGATGATGGAGAAGGGGGGACATTTGCTCTATATTCCTTGATGTGCAGAAATGCAAAAGTCAGTCTTCTTCCTAACCAATTACCTTCTGATACTCGCATTTCTAGTTTCAGACTGAAAGTTCCTTCAGTAGAGTTAGAGAGGTCCTTAAAACTTAAGGAACACCTTGAATCTTCTGTAATACTTAAAAAAGCTCTCCTAATGTTGGTGCTGTTTGGTACTTCTATGGTGATAGCAGGCGGTGTTGTCACACCAGCAATGTCAGTCATGTCTGCTGTGAATGGGTTCAAGGTTGGAGTTGCCAGCGTAGAACAAGGTGAAGTTGTGATGATTACAGTTGCTTGTATTATAGTATTATTTAGTGTACAAAAGTTTGGAACAAGCAAAATGGGCCTTGCTGTTGGCCCTGCTTTGTTTTTATGGCTATGTTGTCTTGGAGGCATCGGGGTTTACAATATTAATAAGTATGGGATGACAGCTTTAAAAGCCTTCAATCCTATCTGTATCTATCAGTATTTTAAAAAAGATTCTTCTCAAGCTTGGATGTCTCTTGGCGGCTGCCTACTTAGTGCAACAGGTTCTGAAGCCATGTTTGCTGACCTCTGTTATTTCTCAGTTAGATCCGTTCAGTTAACCTTCGTTTTTCTTGTTCTGCCCTGCCTGCTTCTGGGATATCTTGGCCAAGCAGCATTTCTTATGGAAAACTCCACCCAGACTGAACAGGTTTTCTTTTCATCAATTCCAAGTGGAATTTTCTGGCCAGTAGTTTTTGTGGCTTTGACAGCAGCATTAATTGCAAGCAGGGCAATGACAACTGCAACATTTTCATGCATAAAGAAAGCAACAGCTTTGGGTTGTTTTCCTCGACTCAAAATAATACACACTTCCCGAAAGTTCATGGGTCATATATATATCCCAGTCATAAATTGGTTTCTACTGGTTTTCTGCCTTGGATTTGTTGCTACTTTTGGAAGCATAAATGAGATTGGCAATGCATATGGCATTGCTGAAATTGGAGTAATGATGGTAACTACAGTTCTTGTAACCATTATTATGCTTCTCATATGGCAAATCAACATTTTCCTCGTTTTATGCTATCTCATTTTCTACCTCGTGTTGGAATTTCTTTTCTTCTCTTCAGTCTTGGGTGGAGTCGGTGATGGCAGCTGGGTCTTGTTGCTTTTTTCTGCAGTTTTGTTTATGATTATGTATATATGGAATTATGGCAGCAAACTGAAATATGAGACTGAGGTTAAGCAAAAGTTGTCAATGGATTTAATGCATAAACTTGGTTCCAATCTTGGCACTATCAGAGCCCCTGGAATAGGGCTAGTTTACAACGAATTGGTCAAAGGGATCCCTGCAATATTTGGACACTTTCTAATGACTCTTCCGGCCATTCACTCCATGATCATATTCGTGTCTATTAAGTATGTTCCAGTCCCTGTGGTGCCGCAGAATGAGAGGTTTCTTTTCCGTCGCGTTTGCCCCAAGAGCTATCACATGTTCCGCTGCATTGCTAGGTATGGCTACAAAGATGTGCGAAAGGAGCACCACCGGATATTTGAGCAACTGATGATCGAGAGTCTTGAGAAATTTGTTCGTCGAGAAGCCCAGGAACGCTCTTTAGAAAGCGACGAGGATCGTGATTCTGATTCCGAGGAAGACGATTCATTCTCGAGAGTTATCGTCGCTCCTAACGGCAGCCTCTATTCCCTTGGTGCTCCGCTCCTTTCCGACTATGTCTGCCTCGAAAAACCAAGTTCAGAATCCTGTTCTTCACTCGCTTGGGCTGCTGCAGATGATCATTCTGGGAAGGGCCTGGAGAGTGAGCTCTCCTTCATACATAAGGCGAAGGAGTCAGGGGTGGTGTACCTTATTGGGCATGGAGATATAAGGGCCAGAAAGGACTCCTGGTTCATAAAAAAATTGATGATAAACTACTTCTATGCCTTCCTCAGGAAGAATTGCAGAAGAGGGATTGCCTCTTTGAGCATCCCTCATGCAAATTTGATGCAGGTGGGCATGACTTACATGGTCTGA

Network for GWHGAAEX004987

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02705.15	K_trans	89	661	4.90E-165

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071805	Biological Process	potassium ion transmembrane transport
GO:0015079	Molecular Function	potassium ion transmembrane transporter activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	22.910
SRP064423	SRR2545915	Juvenile tuber	21.570
SRP108465	SRR5643513	five period of Gastrodia elata	20.920
	SRR5643514	five period of Gastrodia elata	22.040
	SRR5643515	five period of Gastrodia elata	20.470
	SRR5643524	five period of Gastrodia elata	22.680
	SRR5643525	five period of Gastrodia elata	24.040
	SRR5643528	five period of Gastrodia elata	16.830
	SRR5643658	five period of Gastrodia elata	30.730
	SRR5643659	five period of Gastrodia elata	22.150
	SRR5643660	five period of Gastrodia elata	23.280
	SRR5643661	five period of Gastrodia elata	22.250
	SRR5643662	five period of Gastrodia elata	20.840
	SRR5643663	five period of Gastrodia elata	22.950
	SRR5643664	five period of Gastrodia elata	18.440
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	28.640
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	23.560
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	28.000
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	34.750
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	35.470
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	40.600
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	33.500
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	39.070
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	30.170
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	35.410
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	30.630
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	30.630
SRP279888	Gastro	Gastrodia elata tuber	15.42
	Juven	Juvenile tuber	21.31
	Mother_Gastro	Mother tuber of Gastrodia elata	14.78
	Mother_Juven	Mother tuber of Juvenile	18.18