Detail information of GWHGAAEX004989/evm.TU.scaffold_158.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743793217|ref|XP_010923875.1|0PREDICTED: glucan endo-1,3-beta-glucosidase 1-like isoform X1 [Elaeis guineensis]
Swissprottr|O65399|E131_ARATH2.00E-180Glucan endo-1,3-beta-glucosidase 1 (Precursor)
trEMBLtr|K3ZS68|K3ZS68_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si029448m}
TAIRAT1G118207.00E-180O-Glycosyl hydrolases family 17 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000170739512765357-
Transcript Sequence

Network for GWHGAAEX004989

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00332.17Glyco_hydro_17653625.90E-63
PF07983.12X83794502.90E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19891GN1_2_3 Metabolic pathways map01100
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.130
SRR2545915Juvenile tuber12.770
SRP108465SRR5643513five period of Gastrodia elata30.170
SRR5643514five period of Gastrodia elata27.300
SRR5643515five period of Gastrodia elata26.800
SRR5643524five period of Gastrodia elata25.550
SRR5643525five period of Gastrodia elata87.870
SRR5643528five period of Gastrodia elata70.900
SRR5643658five period of Gastrodia elata113.210
SRR5643659five period of Gastrodia elata19.050
SRR5643660five period of Gastrodia elata16.820
SRR5643661five period of Gastrodia elata20.290
SRR5643662five period of Gastrodia elata22.670
SRR5643663five period of Gastrodia elata20.000
SRR5643664five period of Gastrodia elata18.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.000
SRR6049655Rhizomagastrodiae_C368-T10_good_145.860
SRR6049656Rhizomagastrodiae_C368-T07_good_128.590
SRR6049657Rhizomagastrodiae_C368-T07_good_120.320
SRR6049658Rhizomagastrodiae_C368-T04_good_117.700
SRR6049659Rhizomagastrodiae_C368-T04_good_114.480
SRR6049660Rhizomagastrodiae_C368-T01_good_121.520
SRR6049661Rhizomagastrodiae_C368-T04_good_119.680
SRR6049662Rhizomagastrodiae_C368-T01_good_134.440
SRR6049663Rhizomagastrodiae_C368-T01_good_125.600
SRR6049664Rhizomagastrodiae_C368-T10_good_131.410
SRR6049665Rhizomagastrodiae_C368-T10_good_131.410
SRP279888GastroGastrodia elata tuber 17.52
JuvenJuvenile tuber34.29
Mother_GastroMother tuber of Gastrodia elata 28.75
Mother_JuvenMother tuber of Juvenile 21.91