Detail information of GWHGAAEX004991/evm.TU.scaffold_158.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|3.00E-25serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|425896521|gb|AFY10519.1|0calcium dependent protein kinase 1 [Dendrobium catenatum]
Swissprottr|P53683|CDPK2_ORYSJ0Calcium-dependent protein kinase isoform 2
trEMBLtr|T1QDN2|T1QDN2_9ASPA0Calcium dependent protein kinase 1 {ECO:0000313|EMBL:AFY10519.1}
TAIRAT4G047200calcium-dependent protein kinase 21

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000170825555835997-
Transcript Sequence

Network for GWHGAAEX004991

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase853431.20E-72
PF13499.5EF-hand_73914513.80E-11
PF13499.5EF-hand_74615233.00E-12
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.640
SRR2545915Juvenile tuber17.450
SRP108465SRR5643513five period of Gastrodia elata20.750
SRR5643514five period of Gastrodia elata18.700
SRR5643515five period of Gastrodia elata18.440
SRR5643524five period of Gastrodia elata20.040
SRR5643525five period of Gastrodia elata23.420
SRR5643528five period of Gastrodia elata23.980
SRR5643658five period of Gastrodia elata29.160
SRR5643659five period of Gastrodia elata24.480
SRR5643660five period of Gastrodia elata23.730
SRR5643661five period of Gastrodia elata22.720
SRR5643662five period of Gastrodia elata20.960
SRR5643663five period of Gastrodia elata19.910
SRR5643664five period of Gastrodia elata22.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.790
SRR6049655Rhizomagastrodiae_C368-T10_good_123.630
SRR6049656Rhizomagastrodiae_C368-T07_good_127.120
SRR6049657Rhizomagastrodiae_C368-T07_good_122.960
SRR6049658Rhizomagastrodiae_C368-T04_good_123.060
SRR6049659Rhizomagastrodiae_C368-T04_good_125.120
SRR6049660Rhizomagastrodiae_C368-T01_good_125.110
SRR6049661Rhizomagastrodiae_C368-T04_good_124.160
SRR6049662Rhizomagastrodiae_C368-T01_good_130.280
SRR6049663Rhizomagastrodiae_C368-T01_good_127.840
SRR6049664Rhizomagastrodiae_C368-T10_good_129.700
SRR6049665Rhizomagastrodiae_C368-T10_good_129.700
SRP279888GastroGastrodia elata tuber 33.96
JuvenJuvenile tuber24.17
Mother_GastroMother tuber of Gastrodia elata 24.77
Mother_JuvenMother tuber of Juvenile 20.01