Detail information of GWHGAAEX005001/evm.TU.scaffold_158.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|566190077|ref|XP_002315792.2|1.00E-20hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
Swissprottr|Q0JFN7|RH58_ORYSJ8.00E-23DEAD-box ATP-dependent RNA helicase 58, chloroplastic (Precursor)
trEMBLtr|B9HV92|B9HV92_POPTR4.00E-21Uncharacterized protein {ECO:0000313|EMBL:EEF01963.2}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017010612951067472-
Transcript Sequence

Network for GWHGAAEX005001

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.450
SRR2545915Juvenile tuber32.180
SRP108465SRR5643513five period of Gastrodia elata20.090
SRR5643514five period of Gastrodia elata33.740
SRR5643515five period of Gastrodia elata26.320
SRR5643524five period of Gastrodia elata24.210
SRR5643525five period of Gastrodia elata34.780
SRR5643528five period of Gastrodia elata18.820
SRR5643658five period of Gastrodia elata25.680
SRR5643659five period of Gastrodia elata33.580
SRR5643660five period of Gastrodia elata36.970
SRR5643661five period of Gastrodia elata30.330
SRR5643662five period of Gastrodia elata27.260
SRR5643663five period of Gastrodia elata30.800
SRR5643664five period of Gastrodia elata31.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.010
SRR6049655Rhizomagastrodiae_C368-T10_good_130.320
SRR6049656Rhizomagastrodiae_C368-T07_good_134.390
SRR6049657Rhizomagastrodiae_C368-T07_good_138.160
SRR6049658Rhizomagastrodiae_C368-T04_good_154.100
SRR6049659Rhizomagastrodiae_C368-T04_good_155.220
SRR6049660Rhizomagastrodiae_C368-T01_good_147.400
SRR6049661Rhizomagastrodiae_C368-T04_good_143.360
SRR6049662Rhizomagastrodiae_C368-T01_good_136.470
SRR6049663Rhizomagastrodiae_C368-T01_good_145.830
SRR6049664Rhizomagastrodiae_C368-T10_good_128.660
SRR6049665Rhizomagastrodiae_C368-T10_good_128.660
SRP279888GastroGastrodia elata tuber 67.76
JuvenJuvenile tuber37.19
Mother_GastroMother tuber of Gastrodia elata 46.21
Mother_JuvenMother tuber of Juvenile 31.18