Detail information of GWHGAAEX005009/evm.TU.scaffold_158.52
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743759264|ref|XP_010931180.1| | 7.45E-141 | PREDICTED: peroxidase 3-like isoform X1 [Elaeis guineensis] |
| Swissprot | tr|O23044|PER3_ARATH | 1.00E-117 | Peroxidase 3 (Precursor) |
| trEMBL | tr|M5XCQ1|M5XCQ1_PRUPE | 4.00E-130 | Uncharacterized protein {ECO:0000313|EMBL:EMJ16865.1} |
| TAIR | AT1G05260 | 4.00E-117 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000170 | 1322746 | 1328241 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005009
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 2 | 217 | 8.50E-62 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 23.520 |
| SRR2545915 | Juvenile tuber | 81.350 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 196.070 |
| SRR5643514 | five period of Gastrodia elata | 90.610 | |
| SRR5643515 | five period of Gastrodia elata | 108.980 | |
| SRR5643524 | five period of Gastrodia elata | 85.390 | |
| SRR5643525 | five period of Gastrodia elata | 21.080 | |
| SRR5643528 | five period of Gastrodia elata | 14.100 | |
| SRR5643658 | five period of Gastrodia elata | 19.400 | |
| SRR5643659 | five period of Gastrodia elata | 10.580 | |
| SRR5643660 | five period of Gastrodia elata | 16.710 | |
| SRR5643661 | five period of Gastrodia elata | 11.880 | |
| SRR5643662 | five period of Gastrodia elata | 16.700 | |
| SRR5643663 | five period of Gastrodia elata | 12.160 | |
| SRR5643664 | five period of Gastrodia elata | 10.130 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 280.280 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 532.210 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 325.320 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 226.470 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 114.990 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 82.960 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 80.450 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 217.840 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 231.690 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 79.440 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 496.460 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 496.460 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.59 |
| Juven | Juvenile tuber | 30.42 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.27 | |
| Mother_Juven | Mother tuber of Juvenile | 15.14 |