Gene detail

Detail information of GWHGAAEX005013/evm.TU.scaffold_158.58

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|643703776\|gb\|KDP20840.1\|	1.71E-72	hypothetical protein JCGZ_21311 [Jatropha curcas]
Swissprot	tr\|Q94JL3\|BH112_ARATH	1.00E-56	Transcription factor bHLH112
trEMBL	tr\|A0A067JLF7\|A0A067JLF7_JATCU	6.00E-73	Uncharacterized protein {ECO:0000313\|EMBL:KDP20840.1}
TAIR	AT1G61660	4.00E-56	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000170	1371988	1375280	-

Transcript Sequence
>GWHTAAEX005013 TTGGAGCACTTTAGCACAACTATTCTCTAATTTGAAAGCCAGCTATGTTCCAGCATGTGCTCAGTACATTCCCGAAGGTTATAAATAAGATTATATATTTGTATATAAATTCCCTCAACCCCTCCGAATTGCTTCCATTACATCAGAACAAAAAGGCAGCAAAACCAAACCGCACACATAAGCAGCCAAACCCTGAAGAGAGAGAGAGAATAGTGGCCGATACAGAGAGAAGGCGTCTCCTATGGCTGAAGACTTCCAAGCAAACAACTGGTGGAAGAGCGCCTCGACGAGCACCAGCGCCGCCACCGCCGGCCGCCATCCCATGGAGCAGCTCTCCGGCGGCGGCTTCCCCCTCTCCTCTCCCCCCATTGATTGGGCTCCAGCAACCCTTCTCGGAAGAGCTGAGAGCAGCTTTCAAGCCTTGCTTCAAGAAGATCTCAACTCAAGAGACATTAATCACCCCTTTTTCTTCGACAACAACTTGATTCTTGACATGAATTACCAGAAGCAGCAGTCTGCAGACATGCTCGACAGTCACTTGCACTTCACCAACAACACCCCCTTTTGGAATGCTTCCGCTTCCTCGCAGCCCTTCGATCTTCCTTTGAAGAATATGGAAGGAGGGCGAGAGAGGAAGGGAGGCAGTGAGGCTCCACTAAAGAAGATAAGAGTCGAGACGACGCCTTCTCCATTACCAGCTTTCAAAGTGAGGAAAGAGAAATTGGGGGACAGAATCACTGCTCTCCAGCAGCTGGTTTCGCCTTTTGGGAAGACTGATACAGCATCAGTGCTGCACGAAGCCATTGAGTACATAAAATTCCTTCATGATCAAGTCAGTGTCTTGAGTACTCCATACCTGAAGAATGGTCAGCCCATGCAGCAACAGCAACAGAGCTCAGAGAAGAATAAGAGGGAAGGGGAGGGCCAGAAGCAAGATCTAAGAAGCCGGGGGCTATGTTTGGTTCCCATTTCAAGCACCTATCCCGTGGCCAGTGAAACCACTGCCGATTTCTGGACTCCAACTTTCGGAGGAACATACAGATAATTATTTATTTATCAACAAGATGGATTGATTTGCAGCTTAGGGTTTTGAGCATAATTAAGCTTAGGATTATATGACAATTTTTTTAACTGAGAGAAGTTCTTAAATAAGAGTTTTCCTATACTTCCTAATCAATATCCTATAAATATTTTAGGTGATATATTTTGGGAAGTATAGTATTTCTCTAACTGAGTAGGAAAATTTATGATTGATTTTATAGTCTTATTTGAAGAATTGATGCTATGTTTAACTATTACGGCTAGATTAATAAAATATTTGAAGCAGATTATCTTACATATTGTGAAAATATAGACTCTGATGTTCGAAGGGAAAGGGAGGTGGGGAATAAGAAAAGAGAAGGAGAGATGAGGAAAGGCTATGATACAGTAAAGTAACTTTTACTAGCCTGAAAAGAGAAAGAAGAGAATGAGGAAGAGGTGGAGAAAGGAGATCAGGTGGAGGAAGAAAGTTTCGAGGAGAAAGAGGAAGATTGTTGTATTTTTTTTGATAGATGTCAGGCTGGCAGCCGAAAAAAGGAGCTTTGGGAGGGAATAACGGCATTTTTGCTAAGTATTTGAAGGTGGAAGAAAAGCTTGAGAACAGATGCCATATTTGGCGCTGTCGAGCGCTTCGTTTAGGTGTCTTGTTATTCAGTAATTTCATCCTCAAAATTTATTCTATCGAAATTAATGCTACAATTTTTTTTCTTGTGCAAAAAAACTTCTCCTTTGACTCAAGACATACCTAGTACTTTTTGCAGTGTATTTGGATGTTGTTATATATTTTCTCTAGTTTCGCTAGCACATATGAATCAAATTCATAGACAGCCGCCCATTCATAGCTAAACATGAAACTGGATAAGATCTTAAATGAAAGGAAGAATAACCTCATGTTATGGAAGAGATAATACATATAAAAATAGCCAACATATATGAGAAACTCAGATGCTTGACACAAATAGGTTAGTAAATTTAAATGGATCGGTTCTTGATACTTTTTGGTAGTTTGAAGCATGCACTTAGGGAATGATACAACAAGCTTAATATATTTATCACACATAATAGCTTTATTAGAAGATCTGAAGCCACTACCTTACTCATTAGGAAAACCCTATCTGATCTTCTTATAGTACATAATTATATAAATGATATCTTATTTGGTTCCACTAGCAAACCCAATATGAGAAATTTATCTCACTCGTGTGTAAGAAATTAGAAATGAGCTTAATGTAAAAATTATATTTCTTTCTAAGATTGCAAATCAAGCAAGACACATATGACATTTTTCATATCACTAACAAAATACTTTTGAGAATTGCATAAGTGGCTCATTTTTGACAATAGTGAACTTGTAGGTCAAAAATTTTATTATAGTAAATAGGATCAAATCTTTATCTAGCGATAAGTACAACTCACATAATGATTTGCGTTGCTTGTGTGTCAAGTTTCAAGCTAGCCCTAAGGAGACTCATTTAGTTGTTGCTAAGCATCTTTTTTAATACCTTATGGTACCATAATCTTAGGACTTTAGTGTCTGCGCAATAGTATATCATTTGATTTTTTCAGTTTCATTGATTCAAATTTTGTTAGATCAAGGATTTATATGAAAAGCACATCCAATGCATGTCTATTTTTAGCAGTTTGCCAATTTGGTCGCCAAGTTGAAATAAAGTTCAAATGCCTAGTAAATTATTAAGGTAGAACGCATGATAGCTGGAAGTTGTGTTGCTCAAGTCATATGGCTTAATAGCTCAGATTGTTACATCTTCTATCTAAATAAGCCATGTAACATTTTCATCAATAAGC

Network for GWHGAAEX005013

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0046983	Molecular Function	protein dimerization activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.540
SRP064423	SRR2545915	Juvenile tuber	4.090
SRP108465	SRR5643513	five period of Gastrodia elata	3.950
	SRR5643514	five period of Gastrodia elata	3.720
	SRR5643515	five period of Gastrodia elata	2.160
	SRR5643524	five period of Gastrodia elata	1.420
	SRR5643525	five period of Gastrodia elata	15.080
	SRR5643528	five period of Gastrodia elata	8.200
	SRR5643658	five period of Gastrodia elata	16.940
	SRR5643659	five period of Gastrodia elata	6.390
	SRR5643660	five period of Gastrodia elata	3.020
	SRR5643661	five period of Gastrodia elata	5.500
	SRR5643662	five period of Gastrodia elata	2.820
	SRR5643663	five period of Gastrodia elata	3.750
	SRR5643664	five period of Gastrodia elata	4.300
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.880
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.900
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.960
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.910
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.010
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.530
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.300
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.780
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.780
SRP279888	Gastro	Gastrodia elata tuber	7.09
	Juven	Juvenile tuber	8.29
	Mother_Gastro	Mother tuber of Gastrodia elata	2.22
	Mother_Juven	Mother tuber of Juvenile	2.83