Gene detail

Detail information of GWHGAAEX005024/evm.TU.scaffold_158.70

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1479	Nucleoside transporter
nr	gi\|593698890\|ref\|XP_007149910.1\|	hypothetical protein PHAVU_005G109300g [Phaseolus vulgaris]
Swissprot	tr\|Q9M0Y3\|ENT3_ARATH	Equilibrative nucleotide transporter 3
trEMBL	tr\|V7BVC4\|V7BVC4_PHAVU	Uncharacterized protein {ECO:0000313\|EMBL:ESW21904.1}
TAIR	AT4G05120	Major facilitator superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000170	1620932	1626600	-

Transcript Sequence
>GWHTAAEX005024 ACCAACCTAGCATGGGTCATCACACCGCTCCTTGATCAAATCTTGTGGATTAGGGGCAGCGCGCCACATGCCCGCTTCTTGGGTGCCTGCCGCTGCAACGCGCTGCACTTCCTAATTTCACTGCAGCGCGCTGTAGCGCATGCCTTCAATCTGCTCCTTGTTAACAATGTTCCCCTCCAATTAGATGTTATTTGGAAAAACTAGGATGGCTTTGTAAACTCAAAAAACTTGGTAAGCTTGAGTAAGCCTCGAGGTATTTTCTTCTTAACTTGAATACTAAACTTTAAGCAATAAAAAATGATTATTGTCTTTTTCATTCGATCCTCCAAAATGTTTTTTATTGCACTCATCGTGTTTGTTCTGATTGCTGAATCTTCAGAGAAAGATATTCAAGAAATAAAACAACTATGCCATCAGAAATTCACTATTAAAGACATTTGTAACACCAAATACTTCCTAGGAAATAAATACATTAGAGCAAGATAGTATTTTTCTAATGGAAACGCCTATCCCATCCTAGTGTGACAATCAAGCCACTCTGCACTTTACTGAAAATCCTATTTTTCATGAGCTACAACCAAACATTTTAAAATATTAATTGTAACAATCTGTTTCTTGCATCAAAAAAAGGCTCATAACGGTCATCCGCACAATATGCGCTGTCAGCAGAATATTGGGCTCTTGATCCTGCTCATTAACAGTAAGACAGATGGAGGGCTACTAATTCTTGAGAGTCACTATTTTCTGCATAGAATTCAGATAGTACTGACAAGAAAGCTGGTATCCTACTTAATCTTCGCATTTATGTCAATTACAACTGAAGGGATTCAATTTATATGCCTGAAATTTTCTTGGTTTTTAATGCTATATATGGTCTAAATTTTCATTTGCAAGCTTCAGTCTACTACTGAATCATGAGTTATCAAGCTGAGAACGGGGAAGCAGTGAAGAATAAGGGGATATTTGGTGCGATTGTTGCCTGTTGGTTTCTAGGAATTGGCAGCCAGATCGCATGGAATAGCCTGTTAACTATTGAGGACTACTTTGTTAATATATTTCCAAGTTATCACCCCACAAGAGTACTTACTCTAGTTATTCAGCCTTTCAGTTTCTTCAGTGCGGCACTGTTTGTATACCACGAAGCAAAGCTCAATACCAGAACAAGAAATTTACGCGGCTATATCCTCTTCTTTATATGTACAGTACTGGTGATTATTATAGATTTGGCTACATCAGGGAAAGGAGGTGCTGGAGCCTTCACTGGCATGTGTCTTGTTAGCGCAGCTTTTGGGGTTGCTAATGCTCATGTTCAAGGGGGAATGATTGGTGATCTTTCCCATATGCAGCCAAAGTTCATTCAGTCCTTCTTAGCAGGTGCGGCTGCATCGGGAGTTTTAACATCTGCCCTGAGGTTTGTTACAAAGGCCGCGTTTGAGCACAGCCATGATGGCCTTCGAATAGGAGCAATCATGTTCTTTGCCATCGCGGCGTTTCTAGAGCTGTCGTGCGTTCTACTTTATGCGTACATCTTCCCGAATATGCCAATAGTAAGATACTATCGAGCAAAGGCCGCTTCCGAAGGGCTGAAGACGGTTTCAGCCGATCTAGCTGCTGCTGGCATCCAAGTGAACGGTGCTCAGAAGCGGCCTGAAGAAGATCCACAGCCAAAAGATAATCTCGGAATCAAGCAGTTAATGGAGAAGAATTGGGATTATGGATTAGATTTGTTCCTTATTTATGTTCTGACACTGTCTATTTTCCCCGGATTTCTGTCTGAGGATACTGGAAATCATGCTCTGGGATCATGGTATGCCATTGTGTTGATTGCTATGTTTAATGCATCGGACCTCATTGGGAGATACACGCCTCTAATACAGATCTTGAGTATTGAATCTCGAAAAGGCATTGTGATTTCCATTCTGTCTCGCTTCTTATTCATTCCTGCATTCTACTTCACAGCAAAGTATGGAAGCCAAGGTTGGATGATCATGCTAACATTATTGTTGGGGCTAACCAATGGTCATCTGACTGTCTGTGTTTTCACAGCAGCACCTAAAGGATACAAGGGGCCAGAAGCTAATGCTTTGGGAAATATGTTGGTGTTGTTTCTTCTAAGTGGAATTTTTGCAGGTGTTGCACTAGATTGGCTTTGGCTCATTGGCAAAGGATGGTAAAATATTGTTCATTTGAAAAATAAAAAGACAAAGAGGAACTGCCGTATTAGCATTTTCTTTAGACAATTGGATGCTTTAAGTTCAATATGTATTTATCTTGAATTTAGAGAAATCAGAGATACACTGTTGAAAGTAAGAAATGTTTGTAAAAGTTATGTGTTTTATATCTATATTATATGTTTCCATTTCTTAAATTCAG

Network for GWHGAAEX005024

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module5

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01733.17	Nucleoside_tran	126	413	6.50E-35

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:1901642	Biological Process	nucleoside transmembrane transport
GO:0005337	Molecular Function	nucleoside transmembrane transporter activity
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.040
SRP064423	SRR2545915	Juvenile tuber	5.760
SRP108465	SRR5643513	five period of Gastrodia elata	4.560
	SRR5643514	five period of Gastrodia elata	11.000
	SRR5643515	five period of Gastrodia elata	5.590
	SRR5643524	five period of Gastrodia elata	9.450
	SRR5643525	five period of Gastrodia elata	3.110
	SRR5643528	five period of Gastrodia elata	2.070
	SRR5643658	five period of Gastrodia elata	2.960
	SRR5643659	five period of Gastrodia elata	2.510
	SRR5643660	five period of Gastrodia elata	2.000
	SRR5643661	five period of Gastrodia elata	2.360
	SRR5643662	five period of Gastrodia elata	2.050
	SRR5643663	five period of Gastrodia elata	2.220
	SRR5643664	five period of Gastrodia elata	2.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.460
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.470
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.610
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.180
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.700
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.440
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.980
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.490
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.990
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.820
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.820
SRP279888	Gastro	Gastrodia elata tuber	0.99
	Juven	Juvenile tuber	3.27
	Mother_Gastro	Mother tuber of Gastrodia elata	2.70
	Mother_Juven	Mother tuber of Juvenile	6.06