Detail information of GWHGAAEX005026/evm.TU.scaffold_158.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04988.00E-56K+-channel ERG and related proteins, contain PAS/PAC sensor domain
nrgi|743761810|ref|XP_010904933.1|9.25E-80PREDICTED: cyclic nucleotide-gated ion channel 4-like [Elaeis guineensis]
Swissprottr|Q94AS9|CNGC4_ARATH2.00E-56Cyclic nucleotide-gated ion channel 4
trEMBLtr|A0A067GFY2|A0A067GFY2_CITSI2.00E-76Uncharacterized protein {ECO:0000313|EMBL:KDO74236.1} (Fragment)
TAIRAT5G542508.00E-56cyclic nucleotide-gated cation channel 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017016558131658847+
Transcript Sequence

Network for GWHGAAEX005026

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.070
SRR2545915Juvenile tuber2.270
SRP108465SRR5643513five period of Gastrodia elata2.340
SRR5643514five period of Gastrodia elata4.910
SRR5643515five period of Gastrodia elata3.130
SRR5643524five period of Gastrodia elata6.700
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.060
SRR5643661five period of Gastrodia elata0.200
SRR5643662five period of Gastrodia elata0.070
SRR5643663five period of Gastrodia elata0.050
SRR5643664five period of Gastrodia elata0.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.560
SRR6049655Rhizomagastrodiae_C368-T10_good_12.350
SRR6049656Rhizomagastrodiae_C368-T07_good_12.650
SRR6049657Rhizomagastrodiae_C368-T07_good_11.740
SRR6049658Rhizomagastrodiae_C368-T04_good_11.990
SRR6049659Rhizomagastrodiae_C368-T04_good_10.800
SRR6049660Rhizomagastrodiae_C368-T01_good_11.190
SRR6049661Rhizomagastrodiae_C368-T04_good_12.060
SRR6049662Rhizomagastrodiae_C368-T01_good_11.940
SRR6049663Rhizomagastrodiae_C368-T01_good_10.930
SRR6049664Rhizomagastrodiae_C368-T10_good_12.660
SRR6049665Rhizomagastrodiae_C368-T10_good_12.660
SRP279888GastroGastrodia elata tuber 0.13
JuvenJuvenile tuber0.06
Mother_GastroMother tuber of Gastrodia elata 0.11
Mother_JuvenMother tuber of Juvenile 0.32