Detail information of GWHGAAEX005031/evm.TU.scaffold_158.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158334857|ref|YP_001516029.1|2.00E-54sphingosine kinase 2 [Acaryochloris marina MBIC11017]
KOGKOG11161.00E-135Sphingosine kinase, involved in sphingolipid metabolism
nrgi|743868454|ref|XP_010905575.1|0PREDICTED: sphingosine kinase 2-like [Elaeis guineensis]
Swissprottr|Q8L7L1|SPHK1_ARATH4.00E-159Sphingosine kinase 1
trEMBLtr|M0SRJ1|M0SRJ1_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P23800_001}
TAIRAT4G215401.00E-135sphingosine kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017016884691736456+
Transcript Sequence

Network for GWHGAAEX005031

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00781.23DAGK_cat1052391.60E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04718SPHK Metabolic pathways map01100
Sphingolipid metabolismmap00600
VEGF signaling pathwaymap04370
Apelin signaling pathwaymap04371
Calcium signaling pathwaymap04020
Phospholipase D signaling pathwaymap04072
Sphingolipid signaling pathwaymap04071
Fc gamma R-mediated phagocytosismap04666

Gene Ontology

GO term OntologyName
GO:0003951Molecular FunctionNAD+ kinase activity
GO:0016301Molecular Functionkinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.170
SRR2545915Juvenile tuber16.060
SRP108465SRR5643513five period of Gastrodia elata40.260
SRR5643514five period of Gastrodia elata41.940
SRR5643515five period of Gastrodia elata33.350
SRR5643524five period of Gastrodia elata40.130
SRR5643525five period of Gastrodia elata66.440
SRR5643528five period of Gastrodia elata68.440
SRR5643658five period of Gastrodia elata92.660
SRR5643659five period of Gastrodia elata23.210
SRR5643660five period of Gastrodia elata22.280
SRR5643661five period of Gastrodia elata18.390
SRR5643662five period of Gastrodia elata18.910
SRR5643663five period of Gastrodia elata24.550
SRR5643664five period of Gastrodia elata25.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.270
SRR6049655Rhizomagastrodiae_C368-T10_good_132.890
SRR6049656Rhizomagastrodiae_C368-T07_good_129.210
SRR6049657Rhizomagastrodiae_C368-T07_good_124.450
SRR6049658Rhizomagastrodiae_C368-T04_good_128.250
SRR6049659Rhizomagastrodiae_C368-T04_good_126.270
SRR6049660Rhizomagastrodiae_C368-T01_good_125.090
SRR6049661Rhizomagastrodiae_C368-T04_good_123.800
SRR6049662Rhizomagastrodiae_C368-T01_good_123.670
SRR6049663Rhizomagastrodiae_C368-T01_good_127.800
SRR6049664Rhizomagastrodiae_C368-T10_good_139.000
SRR6049665Rhizomagastrodiae_C368-T10_good_139.000
SRP279888GastroGastrodia elata tuber 18.18
JuvenJuvenile tuber51.32
Mother_GastroMother tuber of Gastrodia elata 55.05
Mother_JuvenMother tuber of Juvenile 42.58