Detail information of GWHGAAEX005043/evm.TU.scaffold_158.94


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|565355577|ref|XP_006344662.1|3.33E-08PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 2-like [Solanum tuberosum]
trEMBLtr|M1CB12|M1CB12_SOLTU1.00E-08Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400063687}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017020614812062440+
Transcript Sequence

Network for GWHGAAEX005043

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms178.660
SRR2545915Juvenile tuber73.560
SRP108465SRR5643513five period of Gastrodia elata99.870
SRR5643514five period of Gastrodia elata84.840
SRR5643515five period of Gastrodia elata70.840
SRR5643524five period of Gastrodia elata77.930
SRR5643525five period of Gastrodia elata275.350
SRR5643528five period of Gastrodia elata238.330
SRR5643658five period of Gastrodia elata238.440
SRR5643659five period of Gastrodia elata25.770
SRR5643660five period of Gastrodia elata36.430
SRR5643661five period of Gastrodia elata25.090
SRR5643662five period of Gastrodia elata55.980
SRR5643663five period of Gastrodia elata47.460
SRR5643664five period of Gastrodia elata80.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1133.140
SRR6049655Rhizomagastrodiae_C368-T10_good_1144.480
SRR6049656Rhizomagastrodiae_C368-T07_good_1121.020
SRR6049657Rhizomagastrodiae_C368-T07_good_1180.180
SRR6049658Rhizomagastrodiae_C368-T04_good_1170.630
SRR6049659Rhizomagastrodiae_C368-T04_good_1196.370
SRR6049660Rhizomagastrodiae_C368-T01_good_1126.640
SRR6049661Rhizomagastrodiae_C368-T04_good_1166.930
SRR6049662Rhizomagastrodiae_C368-T01_good_162.950
SRR6049663Rhizomagastrodiae_C368-T01_good_168.640
SRR6049664Rhizomagastrodiae_C368-T10_good_195.590
SRR6049665Rhizomagastrodiae_C368-T10_good_195.590
SRP279888GastroGastrodia elata tuber 103.47
JuvenJuvenile tuber79.69
Mother_GastroMother tuber of Gastrodia elata 328.17
Mother_JuvenMother tuber of Juvenile 190.83