Detail information of GWHGAAEX005046/evm.TU.scaffold_158.95


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|255582168|ref|XP_002531878.1|2.22E-39RALFL33, putative [Ricinus communis]
Swissprottr|Q945T0|RALF_TOBAC1.00E-31Rapid alkalinization factor (Precursor)
trEMBLtr|B9T0V9|B9T0V9_RICCO8.00E-40RALFL33, putative {ECO:0000313|EMBL:EEF30515.1}
TAIRAT1G029006.00E-28rapid alkalinization factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017020989132103319+
Transcript Sequence

Network for GWHGAAEX005046

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05498.10RALF681255.60E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.470
SRR2545915Juvenile tuber22.420
SRP108465SRR5643513five period of Gastrodia elata205.550
SRR5643514five period of Gastrodia elata146.310
SRR5643515five period of Gastrodia elata149.730
SRR5643524five period of Gastrodia elata144.090
SRR5643525five period of Gastrodia elata149.990
SRR5643528five period of Gastrodia elata83.250
SRR5643658five period of Gastrodia elata154.360
SRR5643659five period of Gastrodia elata57.820
SRR5643660five period of Gastrodia elata47.590
SRR5643661five period of Gastrodia elata75.280
SRR5643662five period of Gastrodia elata93.440
SRR5643663five period of Gastrodia elata79.220
SRR5643664five period of Gastrodia elata118.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1165.460
SRR6049655Rhizomagastrodiae_C368-T10_good_1170.900
SRR6049656Rhizomagastrodiae_C368-T07_good_1166.800
SRR6049657Rhizomagastrodiae_C368-T07_good_1161.260
SRR6049658Rhizomagastrodiae_C368-T04_good_1109.590
SRR6049659Rhizomagastrodiae_C368-T04_good_1114.950
SRR6049660Rhizomagastrodiae_C368-T01_good_193.720
SRR6049661Rhizomagastrodiae_C368-T04_good_1105.350
SRR6049662Rhizomagastrodiae_C368-T01_good_1114.780
SRR6049663Rhizomagastrodiae_C368-T01_good_1122.340
SRR6049664Rhizomagastrodiae_C368-T10_good_1251.480
SRR6049665Rhizomagastrodiae_C368-T10_good_1251.480
SRP279888GastroGastrodia elata tuber 49.98
JuvenJuvenile tuber104.09
Mother_GastroMother tuber of Gastrodia elata 395.77
Mother_JuvenMother tuber of Juvenile 235.67