Detail information of GWHGAAEX005048/evm.TU.scaffold_158.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31631.00E-174Uncharacterized conserved protein related to ribosomal protein S8E
nrgi|743785108|ref|XP_010921825.1|0PREDICTED: ribosome biogenesis protein NSA2 homolog [Elaeis guineensis]
trEMBLtr|M0U9M8|M0U9M8_MUSAM7.00E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP16190_001}
TAIRAT5G063601.00E-174Ribosomal protein S8e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017021289602150138-
Transcript Sequence

Network for GWHGAAEX005048

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01201.21Ribosomal_S8e322596.10E-46
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms83.900
SRR2545915Juvenile tuber91.430
SRP108465SRR5643513five period of Gastrodia elata59.150
SRR5643514five period of Gastrodia elata53.510
SRR5643515five period of Gastrodia elata54.060
SRR5643524five period of Gastrodia elata49.070
SRR5643525five period of Gastrodia elata49.780
SRR5643528five period of Gastrodia elata61.110
SRR5643658five period of Gastrodia elata39.280
SRR5643659five period of Gastrodia elata92.610
SRR5643660five period of Gastrodia elata89.920
SRR5643661five period of Gastrodia elata88.500
SRR5643662five period of Gastrodia elata84.430
SRR5643663five period of Gastrodia elata88.270
SRR5643664five period of Gastrodia elata76.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_167.810
SRR6049655Rhizomagastrodiae_C368-T10_good_191.710
SRR6049656Rhizomagastrodiae_C368-T07_good_169.090
SRR6049657Rhizomagastrodiae_C368-T07_good_168.690
SRR6049658Rhizomagastrodiae_C368-T04_good_162.760
SRR6049659Rhizomagastrodiae_C368-T04_good_159.680
SRR6049660Rhizomagastrodiae_C368-T01_good_163.390
SRR6049661Rhizomagastrodiae_C368-T04_good_162.840
SRR6049662Rhizomagastrodiae_C368-T01_good_169.160
SRR6049663Rhizomagastrodiae_C368-T01_good_159.310
SRR6049664Rhizomagastrodiae_C368-T10_good_175.410
SRR6049665Rhizomagastrodiae_C368-T10_good_175.410
SRP279888GastroGastrodia elata tuber 101.90
JuvenJuvenile tuber80.89
Mother_GastroMother tuber of Gastrodia elata 51.02
Mother_JuvenMother tuber of Juvenile 67.27