Detail information of GWHGAAEX005049/evm.TU.scaffold_158.98


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07783.00E-99Protease, Ulp1 family
nrgi|743784583|ref|XP_010921694.1|7.27E-149PREDICTED: putative ubiquitin-like-specific protease 1B isoform X1 [Elaeis guineensis]
Swissprottr|Q94F30|ESD4_ARATH3.00E-110Ubiquitin-like-specific protease ESD4
trEMBLtr|M0SHB7|M0SHB7_MUSAM2.00E-135Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P24010_001}
TAIRAT3G069103.00E-99UB-like protease 1A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017021747362216161+
Transcript Sequence

Network for GWHGAAEX005049

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02902.18Peptidase_C482754545.40E-38
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyULP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008234Molecular Functioncysteine-type peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.820
SRR2545915Juvenile tuber32.300
SRP108465SRR5643513five period of Gastrodia elata19.720
SRR5643514five period of Gastrodia elata20.070
SRR5643515five period of Gastrodia elata18.520
SRR5643524five period of Gastrodia elata18.150
SRR5643525five period of Gastrodia elata20.240
SRR5643528five period of Gastrodia elata21.050
SRR5643658five period of Gastrodia elata19.010
SRR5643659five period of Gastrodia elata22.160
SRR5643660five period of Gastrodia elata24.860
SRR5643661five period of Gastrodia elata14.280
SRR5643662five period of Gastrodia elata22.120
SRR5643663five period of Gastrodia elata21.420
SRR5643664five period of Gastrodia elata25.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.580
SRR6049655Rhizomagastrodiae_C368-T10_good_119.290
SRR6049656Rhizomagastrodiae_C368-T07_good_116.810
SRR6049657Rhizomagastrodiae_C368-T07_good_118.210
SRR6049658Rhizomagastrodiae_C368-T04_good_119.610
SRR6049659Rhizomagastrodiae_C368-T04_good_119.970
SRR6049660Rhizomagastrodiae_C368-T01_good_121.140
SRR6049661Rhizomagastrodiae_C368-T04_good_118.340
SRR6049662Rhizomagastrodiae_C368-T01_good_116.510
SRR6049663Rhizomagastrodiae_C368-T01_good_118.620
SRR6049664Rhizomagastrodiae_C368-T10_good_116.120
SRR6049665Rhizomagastrodiae_C368-T10_good_116.120
SRP279888GastroGastrodia elata tuber 19.97
JuvenJuvenile tuber16.42
Mother_GastroMother tuber of Gastrodia elata 18.06
Mother_JuvenMother tuber of Juvenile 22.14