Detail information of GWHGAAEX005057/evm.TU.scaffold_158.106
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|332666557|ref|YP_004449345.1| | 1.00E-29 | beta-galactosidase [Haliscomenobacter hydrossis DSM 1100] |
| KOG | KOG0626 | 1.00E-45 | Beta-glucosidase, lactase phlorizinhydrolase, and related proteins |
| nr | gi|743844642|ref|XP_010938396.1| | 9.93E-65 | PREDICTED: beta-glucosidase 22-like [Elaeis guineensis] |
| Swissprot | tr|Q60DX8|BGL22_ORYSJ | 2.00E-62 | Beta-glucosidase 22 (Precursor) |
| trEMBL | tr|I7GSQ8|I7GSQ8_AGAAF | 9.00E-63 | Acyl-glucose-dependent anthocyanin 7-O-glucosyltransferase {ECO:0000313|EMBL:BAM29304.1} |
| TAIR | AT1G02850 | 1.00E-45 | beta glucosidase 11 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000170 | 2364256 | 2404251 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005057
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00232.17 | Glyco_hydro_1 | 73 | 227 | 2.40E-30 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.400 |
| SRR2545915 | Juvenile tuber | 5.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.010 |
| SRR5643514 | five period of Gastrodia elata | 3.990 | |
| SRR5643515 | five period of Gastrodia elata | 3.600 | |
| SRR5643524 | five period of Gastrodia elata | 3.410 | |
| SRR5643525 | five period of Gastrodia elata | 4.110 | |
| SRR5643528 | five period of Gastrodia elata | 7.560 | |
| SRR5643658 | five period of Gastrodia elata | 4.050 | |
| SRR5643659 | five period of Gastrodia elata | 3.370 | |
| SRR5643660 | five period of Gastrodia elata | 3.450 | |
| SRR5643661 | five period of Gastrodia elata | 2.070 | |
| SRR5643662 | five period of Gastrodia elata | 3.470 | |
| SRR5643663 | five period of Gastrodia elata | 5.070 | |
| SRR5643664 | five period of Gastrodia elata | 2.370 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.170 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 8.950 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.240 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.750 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.640 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.360 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2.480 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.660 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.450 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.840 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.030 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.030 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.91 |
| Juven | Juvenile tuber | 4.20 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 12.53 | |
| Mother_Juven | Mother tuber of Juvenile | 10.09 |