Detail information of GWHGAAEX005059/evm.TU.scaffold_158.108


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427711650|ref|YP_007060274.1|3.00E-158nucleoside-diphosphate-sugar epimerase [Synechococcus sp. PCC 6312]
KOGKOG14290dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase
nrgi|672122810|ref|XP_008784747.1|0PREDICTED: UDP-glucuronic acid decarboxylase 2-like [Phoenix dactylifera]
Swissprottr|Q9LZI2|UXS2_ARATH0UDP-glucuronic acid decarboxylase 2
trEMBLtr|M4DD22|M4DD22_BRARP0Uncharacterized protein {ECO:0000313|EnsemblPlants:Bra014390.1-P}
TAIRAT3G628300NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017024405152444388+
Transcript Sequence

Network for GWHGAAEX005059

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16363.4GDP_Man_Dehyd1174042.30E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08678UXS1, uxs Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.750
SRR2545915Juvenile tuber17.380
SRP108465SRR5643513five period of Gastrodia elata66.820
SRR5643514five period of Gastrodia elata36.940
SRR5643515five period of Gastrodia elata65.350
SRR5643524five period of Gastrodia elata56.360
SRR5643525five period of Gastrodia elata116.900
SRR5643528five period of Gastrodia elata178.740
SRR5643658five period of Gastrodia elata126.350
SRR5643659five period of Gastrodia elata52.390
SRR5643660five period of Gastrodia elata43.570
SRR5643661five period of Gastrodia elata55.260
SRR5643662five period of Gastrodia elata81.920
SRR5643663five period of Gastrodia elata59.520
SRR5643664five period of Gastrodia elata73.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.930
SRR6049655Rhizomagastrodiae_C368-T10_good_145.900
SRR6049656Rhizomagastrodiae_C368-T07_good_151.050
SRR6049657Rhizomagastrodiae_C368-T07_good_133.600
SRR6049658Rhizomagastrodiae_C368-T04_good_131.980
SRR6049659Rhizomagastrodiae_C368-T04_good_127.880
SRR6049660Rhizomagastrodiae_C368-T01_good_131.800
SRR6049661Rhizomagastrodiae_C368-T04_good_136.840
SRR6049662Rhizomagastrodiae_C368-T01_good_157.460
SRR6049663Rhizomagastrodiae_C368-T01_good_143.370
SRR6049664Rhizomagastrodiae_C368-T10_good_175.900
SRR6049665Rhizomagastrodiae_C368-T10_good_175.900
SRP279888GastroGastrodia elata tuber 47.72
JuvenJuvenile tuber41.90
Mother_GastroMother tuber of Gastrodia elata 253.38
Mother_JuvenMother tuber of Juvenile 162.11