Detail information of GWHGAAEX005065/evm.TU.scaffold_159.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|194335955|ref|YP_002017749.1|1.00E-57NAD-dependent epimerase/dehydratase [Pelodictyon phaeoclathratiforme BU-1]
KOGKOG15022.00E-153Flavonol reductase/cinnamoyl-CoA reductase
nrgi|703083360|ref|XP_010092193.1|3.00E-173Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Morus notabilis]
Swissprottr|Q9S9N9|CCR1_ARATH5.00E-154Cinnamoyl-CoA reductase 1
trEMBLtr|W9R0J3|W9R0J3_9ROSA1.00E-173Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase {ECO:0000313|EMBL:EXB50419.1}
TAIRAT1G159502.00E-153cinnamoyl coa reductase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015812023991225485+
Transcript Sequence

Network for GWHGAAEX005065

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01370.20Epimerase172481.50E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09753CCR Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0050662Molecular Functioncoenzyme binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.450
SRR2545915Juvenile tuber23.060
SRP108465SRR5643513five period of Gastrodia elata72.460
SRR5643514five period of Gastrodia elata108.200
SRR5643515five period of Gastrodia elata66.160
SRR5643524five period of Gastrodia elata97.780
SRR5643525five period of Gastrodia elata664.200
SRR5643528five period of Gastrodia elata744.830
SRR5643658five period of Gastrodia elata728.490
SRR5643659five period of Gastrodia elata39.310
SRR5643660five period of Gastrodia elata56.100
SRR5643661five period of Gastrodia elata50.830
SRR5643662five period of Gastrodia elata83.560
SRR5643663five period of Gastrodia elata69.630
SRR5643664five period of Gastrodia elata90.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_163.450
SRR6049655Rhizomagastrodiae_C368-T10_good_175.200
SRR6049656Rhizomagastrodiae_C368-T07_good_160.260
SRR6049657Rhizomagastrodiae_C368-T07_good_159.110
SRR6049658Rhizomagastrodiae_C368-T04_good_139.640
SRR6049659Rhizomagastrodiae_C368-T04_good_151.120
SRR6049660Rhizomagastrodiae_C368-T01_good_152.190
SRR6049661Rhizomagastrodiae_C368-T04_good_137.660
SRR6049662Rhizomagastrodiae_C368-T01_good_186.630
SRR6049663Rhizomagastrodiae_C368-T01_good_190.950
SRR6049664Rhizomagastrodiae_C368-T10_good_170.570
SRR6049665Rhizomagastrodiae_C368-T10_good_170.570
SRP279888GastroGastrodia elata tuber 62.50
JuvenJuvenile tuber80.45
Mother_GastroMother tuber of Gastrodia elata 160.63
Mother_JuvenMother tuber of Juvenile 157.27