Detail information of GWHGAAEX005073/evm.TU.scaffold_16.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|159037211|ref|YP_001536464.1| | 7.00E-26 | SRA-YDG domain-containing protein [Salinispora arenicola CNS-205] |
| KOG | KOG1082 | 2.00E-107 | Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing |
| nr | gi|672178995|ref|XP_008809654.1| | 0 | PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Phoenix dactylifera] |
| Swissprot | tr|Q9T0G7|SUVH9_ARATH | 0 | Histone-lysine N-methyltransferase family member SUVH9 |
| trEMBL | tr|A2YKQ8|A2YKQ8_ORYSI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:EAZ03669.1} |
| TAIR | AT2G33290_2 | 2.00E-107 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000024 | 97448 | 100188 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005073
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02182.16 | SAD_SRA | 203 | 356 | 4.40E-45 |
| PF05033.15 | Pre-SET | 387 | 486 | 7.30E-19 |
| PF00856.27 | SET | 505 | 637 | 7.80E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SET |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K11420 | EHMT | Metabolic pathways | map01100 |
| Lysine degradation | map00310 | ||
| Longevity regulating pathway | map04211 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016571 | Biological Process | histone methylation |
| GO:0034968 | Biological Process | histone lysine methylation |
| GO:0018024 | Molecular Function | histone-lysine N-methyltransferase activity |
| GO:0005515 | Molecular Function | protein binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0005634 | Cellular Component | nucleus |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.770 |
| SRR2545915 | Juvenile tuber | 13.230 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.680 |
| SRR5643514 | five period of Gastrodia elata | 17.280 | |
| SRR5643515 | five period of Gastrodia elata | 14.960 | |
| SRR5643524 | five period of Gastrodia elata | 17.780 | |
| SRR5643525 | five period of Gastrodia elata | 17.200 | |
| SRR5643528 | five period of Gastrodia elata | 12.920 | |
| SRR5643658 | five period of Gastrodia elata | 14.360 | |
| SRR5643659 | five period of Gastrodia elata | 11.390 | |
| SRR5643660 | five period of Gastrodia elata | 11.660 | |
| SRR5643661 | five period of Gastrodia elata | 12.040 | |
| SRR5643662 | five period of Gastrodia elata | 14.140 | |
| SRR5643663 | five period of Gastrodia elata | 14.540 | |
| SRR5643664 | five period of Gastrodia elata | 14.800 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 24.510 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.020 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.580 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.950 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 22.580 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.350 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.790 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 22.950 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 23.050 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 27.190 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 24.580 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 24.580 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 10.06 |
| Juven | Juvenile tuber | 15.53 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 19.80 | |
| Mother_Juven | Mother tuber of Juvenile | 15.34 |