Gene detail

Detail information of GWHGAAEX005074/evm.TU.scaffold_16.4

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672169438\|ref\|XP_008804747.1\|	PREDICTED: uncharacterized protein LOC103717938 [Phoenix dactylifera]
trEMBL	tr\|M0U7K6\|M0U7K6_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP08960_001}
TAIR	AT1G04650	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000024	132282	157283	-

Transcript Sequence
>GWHTAAEX005074 ATGGGAGCAAAAAGGTATAAGACAAGGCTATGCTACTTTGAGACAAGAAAGATTCCATCTGTGATTAAGAAGTCATATCTTTCATGGAAGAGATGCCACCTCAACGCAAGCATGTGGTGCAAAAACCATCTCCAAGCTACACTTACATCAGTGGAAGAGTTCAAAGAGGAACAACATAGAGGCCTGTTTTATCAGTTAATCGTGGATTTTTTGAGCTTTTCTTCCTCTGTTATTTTATCTCTGACAAAGCTCCCTCTTTTTGAGGAGAAGGCGGATAGGCTTATCATTGAAAACTTCATTGTTGAAATATTAAGCCTAACAAAGACCTTGATTCTTGAGTTCAAGAGGATTAATTTGATTGCTTCGGAAACTCTTAAACTCGGGCAAGTTGTTCTGGATGCAGCTGTAAAACTCTGCAGAGCATATTTTGAAGTTACCAGAGGAAAGTTACCTGGGATGAATGTTAGCAGAAATGAAGGATCTGCTGCTGATGAGGGTAAGGATTATACCAGTCATGTCATCTGCATAGTAGTCTGCACTATTGAAAGCCTGTTTGATATTGGAACCTTCGCTGCTTCTGGTGGTGGTTGTTTCGTGACTATTCTAAACCTTTCCTGGAAAGGCGTTGTTTGCTTATTGCAGCTGGATAAAGGCGTCTTGGCTGAAAAAGTTGATGTGGGAAAAATTATTCTGACTCTAATTTCCTTAACCGTTGAGTCCTTGAAATGTGCTGCTGAAGCCTGGTCAGCATCAAGCTCATGTACCGTAGCCGTAACCGAGGCAAAACGGGCATTTCTACCAATAAAGTTTTATTTAATTAATTCTGTCAGGATTTCTTCTGAGTATCCATGTGAGGCCATGCATATATGCAGGGAAATAGTGAGGTGTGTGATGTTGATCTCATCTCTATGCATTATTCTTAGTAAAGAAACCCATCTCAAAGCTGTTAGTGAAGCATTGGCAGAATTGCTAGAACCGACATCTTTTCTCTTGCTGCACTCACTGCTAAATTCAGCTGAGGTGAAATTTGATTCTAAATTGCAGATTCTGGAATGGCTATTTGCGTATGAGATAGATTTTTGCACGTTAGATCAAGATAAGAACATTTATACAGCTGCGCTGTCTCCTACCTTGGATAGTGTTTTTGATATAAGCTGCGATGGTCTGCCTAGAGCTGAGTCTCTATTGCTAGGAAAGTTTTACTTGTCTCTGAACATCCTCAGGGGCTCTTCATCATTGAGAGAGGAAATCATACTAGAAATCTCCAAGAAGCTTGATAGTCTTATGTCTGTTTTTACAAATGCATATGTATTCTCTTGTGTTCTTGGTCTGAAAATACCAGTATTTAATGCCTTGGGAACTTCCTCTGGGATAGTTTGGCAACCCATGCACTTTTTTGCCGTGAGCACATTGAAATCCTTCATGATTGTGGGAGCTTCTTCCAGGCTCATGTGGATGGAGATTGAAACTTTTCTACTTAAGAATCTTTTTCATCCTCACTTCCTTTGTGTGGATATTGCTAGACAGCTTCTGTGCTTTCTTATATGTCATGCTGAAACTAACATGGTGAGCCAAGTTTTTGAAAAATTGTGCCTGCTGCTGAAGACTGTTGCATCATCGAAGCCTTCTCTTTCACCATTGTCTCCTCTAAGGCAGCTGGCCAGATCAATATCGTACATTCTCATTTATTCAACATCTGCCAGTGTCGACCAAGTGTATAACAGCATAGTAAGTGAGGACAAGTCTGATTTGTCGTCGCTCATGCATGCAGGATTATTGATGGAGGGATTCCCATTAGGCTCCTTATCTGACAAACTTAACATAGTGGCCACAAGGAAGATTATTTCTAACTTTGCTCGTTTTATAGAGAATAACTCCAAGGACCTTGAACTGGATCCTATTTCTCAATCTTGCAAGTCCGGCTTGCTCGGGTTGCCTGTTCATGTGCTGTCATCTGCATTAAACTCACGGCATATTAAAAGTTCTGATGCTATTAATGGAAAAGTCATCACCCAGCTACTGAAGTTTACTACTACACTGATTCAAACGTTCAGAAATGCTGGAGAAGGGTTTAAAAACCAATATGCTAAACTTCTTGGTGCAATATTAGAGCTAATATCAAATGCAAAACATCTCTATGGCTATGCTGAAAGCAGAGAAATTCTTTTGGAGCTGCAGAAACTATTTGCGGAACCCAGTGCTTTAATTTCTCAATGCCTGCCTTATCTTGCCACATTCCTGGCCGGTCTTAGTCATATGCAGATTACTGAAGACGGTGAAAACCCGCTTTCCTCTGCAATTTGGGAGTTGTTCCATTTGCTGCTTAGAGAGAGACACTGGGCTTCTGTTCATTTGGCTCTTGCGGCATTTGGATATTTCGCTGCTCGTACTTCATGCACGGAACTTTGGAGGTTCGTTCCTTCCAATGCAGCTCTCTCATTTGATTCTTCTACTGGATGTGAGGCAAAGTATGACACTTTCATGAATGAGCTTAAGGGATTTCTTGAAAAGGAAGGGGCTTTATGTGACACTTTTATATGTAAAGAGCAGCTATGTTTTCTCCTAAGGGAAGGCTTTAGTCTCAAGGGATTGACTAAGGCGTCTATTTCCCTGGATGAAGTCTCAGGATTTCAGACTGATAACTCAGGGAGGAAGAAAATAAAGCTTCCAGATGGAGTTTTTGAAGGAATGAATTTGCTGCAGAGTGGTTTAGAGGTTATAAACAATGCTCTGTCGCAGTCTGACTCTGTGGAACATAACGAAGAACTTTACGTGCATATTATACGCCTGAAGGAAGCAGTTTCTCAGCTGGCTAATCTGTCTAATACCCATCCTTAA

Network for GWHGAAEX005074

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14868.5	DUF4487	199	802	5.80E-143

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.520
SRP064423	SRR2545915	Juvenile tuber	3.010
SRP108465	SRR5643513	five period of Gastrodia elata	3.290
	SRR5643514	five period of Gastrodia elata	3.610
	SRR5643515	five period of Gastrodia elata	2.370
	SRR5643524	five period of Gastrodia elata	3.340
	SRR5643525	five period of Gastrodia elata	2.700
	SRR5643528	five period of Gastrodia elata	1.560
	SRR5643658	five period of Gastrodia elata	2.560
	SRR5643659	five period of Gastrodia elata	0.970
	SRR5643660	five period of Gastrodia elata	1.050
	SRR5643661	five period of Gastrodia elata	1.680
	SRR5643662	five period of Gastrodia elata	0.570
	SRR5643663	five period of Gastrodia elata	0.380
	SRR5643664	five period of Gastrodia elata	0.460
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.530
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.250
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.190
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.790
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.210
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.620
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.010
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.470
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.400
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.720
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.800
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.800
SRP279888	Gastro	Gastrodia elata tuber	0.60
	Juven	Juvenile tuber	2.18
	Mother_Gastro	Mother tuber of Gastrodia elata	0.40
	Mother_Juven	Mother tuber of Juvenile	1.61