Detail information of GWHGAAEX005078/evm.TU.scaffold_16.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07997.00E-138Branching enzyme
nrgi|672169420|ref|XP_008804738.1|9.93E-172PREDICTED: xylosyltransferase 1-like [Phoenix dactylifera]
trEMBLtr|M0RW23|M0RW23_MUSAM4.00E-172Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P01150_001}
TAIRAT3G240407.00E-138Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000024249521271076+
Transcript Sequence

Network for GWHGAAEX005078

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02485.20Branch773165.90E-48
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT14

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008375Molecular Functionacetylglucosaminyltransferase activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.660
SRR2545915Juvenile tuber10.960
SRP108465SRR5643513five period of Gastrodia elata17.080
SRR5643514five period of Gastrodia elata14.130
SRR5643515five period of Gastrodia elata16.510
SRR5643524five period of Gastrodia elata17.520
SRR5643525five period of Gastrodia elata22.590
SRR5643528five period of Gastrodia elata32.810
SRR5643658five period of Gastrodia elata25.360
SRR5643659five period of Gastrodia elata18.220
SRR5643660five period of Gastrodia elata17.760
SRR5643661five period of Gastrodia elata21.650
SRR5643662five period of Gastrodia elata15.970
SRR5643663five period of Gastrodia elata18.650
SRR5643664five period of Gastrodia elata14.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.700
SRR6049655Rhizomagastrodiae_C368-T10_good_133.890
SRR6049656Rhizomagastrodiae_C368-T07_good_116.900
SRR6049657Rhizomagastrodiae_C368-T07_good_113.770
SRR6049658Rhizomagastrodiae_C368-T04_good_118.100
SRR6049659Rhizomagastrodiae_C368-T04_good_115.010
SRR6049660Rhizomagastrodiae_C368-T01_good_115.560
SRR6049661Rhizomagastrodiae_C368-T04_good_114.250
SRR6049662Rhizomagastrodiae_C368-T01_good_119.620
SRR6049663Rhizomagastrodiae_C368-T01_good_118.460
SRR6049664Rhizomagastrodiae_C368-T10_good_120.140
SRR6049665Rhizomagastrodiae_C368-T10_good_120.140
SRP279888GastroGastrodia elata tuber 14.02
JuvenJuvenile tuber13.48
Mother_GastroMother tuber of Gastrodia elata 29.63
Mother_JuvenMother tuber of Juvenile 22.84