Detail information of GWHGAAEX005087/evm.TU.scaffold_16.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695029310|ref|XP_009402067.1|6.98E-65PREDICTED: transcription factor bHLH57-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M128|BH057_ARATH3.00E-52Transcription factor bHLH57
trEMBLtr|M0RU74|M0RU74_MUSAM1.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P21440_001}
TAIRAT4G014601.00E-51basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000024403210405880-
Transcript Sequence

Network for GWHGAAEX005087

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH591091.50E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.090
SRP108465SRR5643513five period of Gastrodia elata0.080
SRR5643514five period of Gastrodia elata0.860
SRR5643515five period of Gastrodia elata0.310
SRR5643524five period of Gastrodia elata0.470
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.130
SRR5643660five period of Gastrodia elata0.220
SRR5643661five period of Gastrodia elata0.070
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.300
SRR6049657Rhizomagastrodiae_C368-T07_good_10.160
SRR6049658Rhizomagastrodiae_C368-T04_good_10.280
SRR6049659Rhizomagastrodiae_C368-T04_good_10.250
SRR6049660Rhizomagastrodiae_C368-T01_good_10.610
SRR6049661Rhizomagastrodiae_C368-T04_good_10.080
SRR6049662Rhizomagastrodiae_C368-T01_good_10.170
SRR6049663Rhizomagastrodiae_C368-T01_good_10.330
SRR6049664Rhizomagastrodiae_C368-T10_good_10.050
SRR6049665Rhizomagastrodiae_C368-T10_good_10.050
SRP279888GastroGastrodia elata tuber 0.02
JuvenJuvenile tuber0.02
Mother_GastroMother tuber of Gastrodia elata 0.05
Mother_JuvenMother tuber of Juvenile 0.03