Detail information of GWHGAAEX005089/evm.TU.scaffold_16.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743776030|ref|XP_010918412.1|6.95E-16PREDICTED: uncharacterized protein LOC105042790 [Elaeis guineensis]
trEMBLtr|M0U9C0|M0U9C0_MUSAM2.00E-12Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP15110_001}
TAIRAT5G543003.00E-07Protein of unknown function (DUF761)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000024632134633291+
Transcript Sequence

Network for GWHGAAEX005089

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14364.5DUF440849750.00012
PF05553.10DUF7611672002.90E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.220
SRR2545915Juvenile tuber250.560
SRP108465SRR5643513five period of Gastrodia elata8.380
SRR5643514five period of Gastrodia elata36.860
SRR5643515five period of Gastrodia elata18.760
SRR5643524five period of Gastrodia elata32.310
SRR5643525five period of Gastrodia elata81.840
SRR5643528five period of Gastrodia elata59.510
SRR5643658five period of Gastrodia elata203.890
SRR5643659five period of Gastrodia elata122.080
SRR5643660five period of Gastrodia elata119.490
SRR5643661five period of Gastrodia elata167.190
SRR5643662five period of Gastrodia elata40.970
SRR5643663five period of Gastrodia elata23.560
SRR5643664five period of Gastrodia elata52.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.360
SRR6049655Rhizomagastrodiae_C368-T10_good_118.210
SRR6049656Rhizomagastrodiae_C368-T07_good_134.130
SRR6049657Rhizomagastrodiae_C368-T07_good_131.700
SRR6049658Rhizomagastrodiae_C368-T04_good_147.790
SRR6049659Rhizomagastrodiae_C368-T04_good_149.580
SRR6049660Rhizomagastrodiae_C368-T01_good_170.450
SRR6049661Rhizomagastrodiae_C368-T04_good_154.170
SRR6049662Rhizomagastrodiae_C368-T01_good_121.870
SRR6049663Rhizomagastrodiae_C368-T01_good_158.040
SRR6049664Rhizomagastrodiae_C368-T10_good_115.660
SRR6049665Rhizomagastrodiae_C368-T10_good_115.660
SRP279888GastroGastrodia elata tuber 22.05
JuvenJuvenile tuber17.14
Mother_GastroMother tuber of Gastrodia elata 20.92
Mother_JuvenMother tuber of Juvenile 15.85