Gene detail

Detail information of GWHGAAEX005092/evm.TU.scaffold_16.23

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|20094304\|ref\|NP_614151.1\|	3.00E-26	2-phosphoglycerate kinase [Methanopyrus kandleri AV19]
nr	gi\|719993683\|ref\|XP_010253954.1\|	0	PREDICTED: uncharacterized protein DDB_G0273453/DDB_G0273565-like [Nelumbo nucifera]
trEMBL	tr\|M0U5T1\|M0U5T1_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP02690_001}
TAIR	AT5G60760	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000024	669678	676032	-

Transcript Sequence
>GWHTAAEX005092 CTTGCACATATAATTGCAGATCGTACCTTACACGATTTCGCCCGCTCTTTCCTTCCAATTTCCAAGCAAGAGAGAAAAAGCGACGCAGAGGAAAACTTTCCTCGGATCACTGCGGTGCGCGGATAACCGTGAGATGAAGATGACTTCGAGGCGACGATGTGTGTGCTCTTGTCATGCCTAATTGATCTCTTCCAAGTTTCAACCCTTCCAGCTTATACAATTTCTCGCCTTCAACCTTGAAATTCCGATCTCAAATACCATCTCTTCTGCATTTATCAACCTATTAGTCTTTCCGTAACCCTACATTGTTCTTTGAGTTAAAATCAGGCGGAGTTCGTGTTTAGAAGTGGGATAATTGTCTGGATGGTTGATCCTCCGAAGATACTTTACATCGTGGTTGTGGACGAGGAGGAGAGAGGATTTTATGGAGATGAGGGCGGTGCCTTCAGGTATACGCGGCCAGTGCTGCAAAGTACGTTGCAGCTCATGGGATGCAAACCACGGCACGCGTTCAAGATTAGTCGAACGGTATTTGATGTGATGAGAAATGAATGCAAAAAGGATGGTTCTATTCATGCTGTAGCTGATTTAGCTGGCTCGGATACCTCATCCAGGAGATCTGGAAGAGAGAGCAGATGCGGATTGCTGAACCGGAATAAGACTAATGAAACTATAGATATAAGTTCAATTCAGTTTGAGCTATACAAAAGACAGACAACTGTTATTGTTGCAAGAGAAATATTCTTGAGTATGGTTTGTGATGCACTTTCTGCATACAAGTATGTGGGTCCCAATCAAAAGATCGACTTGCTTCTGGCGTGCAGAATTCGAGAAAGGAAAGAGTCAGTGACCATTCTTTTGTGTGGAACAAGTGGGTGTGGGAAGTCTACCCTGTCGGTCTTACTGGGAAGCAGATTGGGCATTACAACCGTAATTTCAACTGATTCAATTCGCCACATGATGAGAAGCTTTGTAGATGAGAAGGAAAATCCGCTGCTGTGGTCCTCTACATATCACGCCGGCGAATTCCTGGATCCGACGGCAGTTGCAGAAGCAAAGGCCAAAAGGAAAGCCAAAAGGCTAGTTCCTTCCTCTGAAAAGCATGGGAATCAATCACTGGATGCAGCAGATTCATCAGGATTTCAAGCCATCGGCAAAACGCAAATGGCGGTTGAGGGATTCAAGGCGCAGAGCGAGATGGTCATTGACAGCCTCGATCGTTTGATTACAGCATGGGAGGATCAGAAGCAATCTGTGATTGTTGAAGGCGTTCACTTGAGCCTCAATTTTGTGATGGGGCTGATGAAAAGGCATCGATCGATAATTCCGTTCATGATTCATATTGCGAGAGAGGACAAACATGTGGAGAGGTTTGCGGTGCGGGCCAAATACATGACATTGGATCCTTCGAAGAACAAGTATGTAAAGTATATTCGGAACATAAGGAGGATTCAGGAGTACCTGTGCAATCGGGCGGATAAGCATCTGGTGCCGAAGATAAACAACACGAACGTGGATCGCAGCGTGGCAGCGATCCACGCCACAGTGTTCAGCTGCCTGAGGCGTCGGGAGGCAGGAGAGCAGCTCTACGATCCGACCACGAACACGGTTCCCGTAGTTCAACAGGAGCATCGGAGCCAATGCGCTGCGAACTCGCTGAGTTCCAAGCGAATGTTTCAGCTGATACAGAGGCTGGGATCCTCCAGGCACTTGATGGCTCTCGTCAATACCGATGGGTCCGTTGCCAAGGCCTGGCCAGTCGAGCCCGTTGAGAGCTGCGCGGGAAGCCCCGTCTACGGTCCCCTGAAGATCGGCAAGGCGGAGCCTATAAATCTTCAGTTCGGCAATTACGGGATCAGCGCTTGGCCGAATGATGCCGGAAGTATTGGATCCTGCTCCAGCTCTCCTGGGCATGCTGGAGGAGCTTTGAAAGAGCCTATGGAGGAAGCGTCCGTGTCCGGAAGTGAGGACGAGGAGGCCATCCAGCCGCGCGGTGCCGAGAGCGAAGAAGATGATCCAAGCGACATCGAGCCGGAAAGCGTTCATGAGGAGATGGAGGGCTCTGTGGATGAGGAATCAATCGGTTCGGACGAGGAGTACGACGATTTGGCCATGAAGGACGACGAATATTCATCGGGCGAGAGAGGGCCGGCGAATCCGCTCCTCGAGGAGGACGAATGCTCGCGCAGGATGCGTCGCTGCCGCTCTCACTCGGATCGAAATCAAAGAAGCAAAGGGGAAAGAATCAGGAATCAAGCGAGAATTCTCGGTCGATCTCGCAGCATCCCGGCTTCGTTCGCCGTTCCTCAGGCTCGCAGCGGAGTCGGGATTCTTCGCTTTTGAATATCCTTTATTCAGCATCGCCTTCGTCATTTGAGCCTCGTGCTGTTATTTACTATAAGACGCCCAAAATATCTAAAGAAATGTATTAAAAACAGATTCGGGAAATACATAAGGTTAATAACCGTATGCATCTTAATAGAGAAACCGGGCTGAGAAGGTCCGAATATTCTTTGTTGAGATGTATTTGAAACATTCATTCTCTGTTTTATAGAGCACGAAGCAAATATGTGGTCGGTGAAATTTGAATTAAGGATCTAACATCCCGAGATACAACAACACCATTCACAATGTTTTGCAATATCAAATCTATTTAAATTGCTGTGTCACGATTTTTTCTCAAAAGTGGTTCACTTTGCAAGTGATAGGTTCAATATTGCTTGTGTGCAACTTCTATGTTTCACTCTCATTAGTTTTATATAGCTTCTATTACTTTTGTTGGAGAATAGAGTAATTTCTTAAAAAGCATTGAGATGAAATCAAATTCCCACTACACAGCTTATTACTTGAGCTAGAATGATTAGCATAAGGTTTAAGTAGTATGATTAAAATTCTTCAAAGCTCTAATTAGGTCTTTTCATTATTTTAATATGATGATTCTCCTTCACTCTTATTTATATATTAGATACT

Network for GWHGAAEX005092

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	30.860
SRP064423	SRR2545915	Juvenile tuber	22.420
SRP108465	SRR5643513	five period of Gastrodia elata	23.110
	SRR5643514	five period of Gastrodia elata	26.980
	SRR5643515	five period of Gastrodia elata	28.760
	SRR5643524	five period of Gastrodia elata	36.020
	SRR5643525	five period of Gastrodia elata	30.240
	SRR5643528	five period of Gastrodia elata	44.120
	SRR5643658	five period of Gastrodia elata	35.170
	SRR5643659	five period of Gastrodia elata	46.150
	SRR5643660	five period of Gastrodia elata	59.910
	SRR5643661	five period of Gastrodia elata	53.510
	SRR5643662	five period of Gastrodia elata	34.310
	SRR5643663	five period of Gastrodia elata	31.230
	SRR5643664	five period of Gastrodia elata	28.440
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.870
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.660
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.840
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.630
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	20.970
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	21.050
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	21.470
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.120
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.920
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.120
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.930
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.930
SRP279888	Gastro	Gastrodia elata tuber	16.58
	Juven	Juvenile tuber	28.54
	Mother_Gastro	Mother tuber of Gastrodia elata	48.19
	Mother_Juven	Mother tuber of Juvenile	37.41