Detail information of GWHGAAEX005094/evm.TU.scaffold_16.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13039.00E-26Amino acid transporters
nrgi|672175306|ref|XP_008807703.1|1.69E-37PREDICTED: vacuolar amino acid transporter 1-like, partial [Phoenix dactylifera]
trEMBLtr|A0A068TWQ1|A0A068TWQ1_COFCA5.00E-37Coffea canephora
TAIRAT5G021809.00E-26Transmembrane amino acid transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000024751039753822-
Transcript Sequence

Network for GWHGAAEX005094

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans15999.00E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15015SLC32A, VGAT GABAergic synapse map04727
Retrograde endocannabinoid signalingmap04723
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.440
SRR2545915Juvenile tuber5.380
SRP108465SRR5643513five period of Gastrodia elata8.160
SRR5643514five period of Gastrodia elata4.510
SRR5643515five period of Gastrodia elata6.350
SRR5643524five period of Gastrodia elata3.940
SRR5643525five period of Gastrodia elata10.150
SRR5643528five period of Gastrodia elata6.770
SRR5643658five period of Gastrodia elata16.810
SRR5643659five period of Gastrodia elata2.190
SRR5643660five period of Gastrodia elata2.490
SRR5643661five period of Gastrodia elata2.250
SRR5643662five period of Gastrodia elata1.920
SRR5643663five period of Gastrodia elata2.030
SRR5643664five period of Gastrodia elata1.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.810
SRR6049655Rhizomagastrodiae_C368-T10_good_111.520
SRR6049656Rhizomagastrodiae_C368-T07_good_113.180
SRR6049657Rhizomagastrodiae_C368-T07_good_122.790
SRR6049658Rhizomagastrodiae_C368-T04_good_117.910
SRR6049659Rhizomagastrodiae_C368-T04_good_119.270
SRR6049660Rhizomagastrodiae_C368-T01_good_119.420
SRR6049661Rhizomagastrodiae_C368-T04_good_115.510
SRR6049662Rhizomagastrodiae_C368-T01_good_110.560
SRR6049663Rhizomagastrodiae_C368-T01_good_110.290
SRR6049664Rhizomagastrodiae_C368-T10_good_110.920
SRR6049665Rhizomagastrodiae_C368-T10_good_110.920
SRP279888GastroGastrodia elata tuber 3.27
JuvenJuvenile tuber9.45
Mother_GastroMother tuber of Gastrodia elata 4.65
Mother_JuvenMother tuber of Juvenile 6.18