Detail information of GWHGAAEX005097/evm.TU.scaffold_16.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13033.00E-167Amino acid transporters
nrgi|672187999|ref|XP_008813474.1|0PREDICTED: vacuolar amino acid transporter 1-like isoform X2 [Phoenix dactylifera]
trEMBLtr|M0RWM5|M0RWM5_MUSAM3.00E-177Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P03170_001}
TAIRAT2G391303.00E-167Transmembrane amino acid transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000024767196805316-
Transcript Sequence

Network for GWHGAAEX005097

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans1674251.80E-48
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15015SLC32A, VGAT GABAergic synapse map04727
Retrograde endocannabinoid signalingmap04723
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.540
SRR2545915Juvenile tuber15.610
SRP108465SRR5643513five period of Gastrodia elata19.890
SRR5643514five period of Gastrodia elata8.530
SRR5643515five period of Gastrodia elata15.450
SRR5643524five period of Gastrodia elata9.340
SRR5643525five period of Gastrodia elata31.570
SRR5643528five period of Gastrodia elata14.970
SRR5643658five period of Gastrodia elata42.960
SRR5643659five period of Gastrodia elata3.880
SRR5643660five period of Gastrodia elata4.890
SRR5643661five period of Gastrodia elata3.420
SRR5643662five period of Gastrodia elata1.770
SRR5643663five period of Gastrodia elata2.420
SRR5643664five period of Gastrodia elata3.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_153.370
SRR6049655Rhizomagastrodiae_C368-T10_good_139.820
SRR6049656Rhizomagastrodiae_C368-T07_good_137.740
SRR6049657Rhizomagastrodiae_C368-T07_good_174.100
SRR6049658Rhizomagastrodiae_C368-T04_good_152.260
SRR6049659Rhizomagastrodiae_C368-T04_good_155.440
SRR6049660Rhizomagastrodiae_C368-T01_good_165.640
SRR6049661Rhizomagastrodiae_C368-T04_good_143.120
SRR6049662Rhizomagastrodiae_C368-T01_good_124.110
SRR6049663Rhizomagastrodiae_C368-T01_good_128.520
SRR6049664Rhizomagastrodiae_C368-T10_good_124.390
SRR6049665Rhizomagastrodiae_C368-T10_good_124.390
SRP279888GastroGastrodia elata tuber 6.71
JuvenJuvenile tuber36.69
Mother_GastroMother tuber of Gastrodia elata 9.41
Mother_JuvenMother tuber of Juvenile 16.62