Detail information of GWHGAAEX005111/evm.TU.scaffold_16.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26410Predicted seven transmembrane receptor - rhodopsin family
nrgi|743833423|ref|XP_010935262.1|0PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Elaeis guineensis]
trEMBLtr|A0A059AP83|A0A059AP83_EUCGR0Uncharacterized protein {ECO:0000313|EMBL:KCW55653.1}
TAIRAT4G383600Protein of unknown function (DUF300)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002415955071632992+
Transcript Sequence

Network for GWHGAAEX005111

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03619.15Solute_trans_a213015.80E-85
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.490
SRR2545915Juvenile tuber15.460
SRP108465SRR5643513five period of Gastrodia elata17.810
SRR5643514five period of Gastrodia elata19.080
SRR5643515five period of Gastrodia elata21.420
SRR5643524five period of Gastrodia elata19.630
SRR5643525five period of Gastrodia elata34.290
SRR5643528five period of Gastrodia elata25.310
SRR5643658five period of Gastrodia elata30.370
SRR5643659five period of Gastrodia elata13.570
SRR5643660five period of Gastrodia elata16.070
SRR5643661five period of Gastrodia elata13.980
SRR5643662five period of Gastrodia elata13.520
SRR5643663five period of Gastrodia elata14.050
SRR5643664five period of Gastrodia elata10.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.460
SRR6049655Rhizomagastrodiae_C368-T10_good_120.480
SRR6049656Rhizomagastrodiae_C368-T07_good_113.640
SRR6049657Rhizomagastrodiae_C368-T07_good_118.540
SRR6049658Rhizomagastrodiae_C368-T04_good_116.180
SRR6049659Rhizomagastrodiae_C368-T04_good_117.880
SRR6049660Rhizomagastrodiae_C368-T01_good_115.510
SRR6049661Rhizomagastrodiae_C368-T04_good_115.500
SRR6049662Rhizomagastrodiae_C368-T01_good_113.030
SRR6049663Rhizomagastrodiae_C368-T01_good_111.140
SRR6049664Rhizomagastrodiae_C368-T10_good_114.400
SRR6049665Rhizomagastrodiae_C368-T10_good_114.400
SRP279888GastroGastrodia elata tuber 9.74
JuvenJuvenile tuber10.50
Mother_GastroMother tuber of Gastrodia elata 16.94
Mother_JuvenMother tuber of Juvenile 13.45