Detail information of GWHGAAEX005113/evm.TU.scaffold_16.52


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|307545594|ref|YP_003898073.1|6.00E-15hypothetical protein HELO_3004 [Halomonas elongata DSM 2581]
nrgi|694997820|ref|XP_009401340.1|1.24E-82PREDICTED: uncharacterized protein LOC103985389 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0S005|M0S005_MUSAM5.00E-83Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P14970_001}
TAIRAT4G383703.00E-66Phosphoglycerate mutase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002416695111682725-
Transcript Sequence

Network for GWHGAAEX005113

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00300.21His_Phos_1512034.70E-20
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.180
SRR2545915Juvenile tuber8.170
SRP108465SRR5643513five period of Gastrodia elata12.060
SRR5643514five period of Gastrodia elata15.540
SRR5643515five period of Gastrodia elata13.750
SRR5643524five period of Gastrodia elata13.120
SRR5643525five period of Gastrodia elata7.620
SRR5643528five period of Gastrodia elata7.770
SRR5643658five period of Gastrodia elata8.630
SRR5643659five period of Gastrodia elata17.140
SRR5643660five period of Gastrodia elata12.570
SRR5643661five period of Gastrodia elata16.690
SRR5643662five period of Gastrodia elata14.460
SRR5643663five period of Gastrodia elata15.260
SRR5643664five period of Gastrodia elata14.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.410
SRR6049655Rhizomagastrodiae_C368-T10_good_112.700
SRR6049656Rhizomagastrodiae_C368-T07_good_19.600
SRR6049657Rhizomagastrodiae_C368-T07_good_17.250
SRR6049658Rhizomagastrodiae_C368-T04_good_15.150
SRR6049659Rhizomagastrodiae_C368-T04_good_14.220
SRR6049660Rhizomagastrodiae_C368-T01_good_17.980
SRR6049661Rhizomagastrodiae_C368-T04_good_16.850
SRR6049662Rhizomagastrodiae_C368-T01_good_112.360
SRR6049663Rhizomagastrodiae_C368-T01_good_17.160
SRR6049664Rhizomagastrodiae_C368-T10_good_114.400
SRR6049665Rhizomagastrodiae_C368-T10_good_114.400
SRP279888GastroGastrodia elata tuber 6.37
JuvenJuvenile tuber9.02
Mother_GastroMother tuber of Gastrodia elata 7.41
Mother_JuvenMother tuber of Juvenile 3.95