Detail information of GWHGAAEX005115/evm.TU.scaffold_16.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|257056133|ref|YP_003133965.1|5.00E-13putative carboxypeptidase [Saccharomonospora viridis DSM 43017]
KOGKOG26504.00E-148Zinc carboxypeptidase
nrgi|743833360|ref|XP_010935247.1|1.42E-180PREDICTED: carboxypeptidase A6 isoform X1 [Elaeis guineensis]
trEMBLtr|D7UD93|D7UD93_VITVI1.00E-170Putative uncharacterized protein {ECO:0000313|EMBL:CBI40708.3}
TAIRAT5G423204.00E-148Zn-dependent exopeptidases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002417681611785117-
Transcript Sequence

Network for GWHGAAEX005115

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00246.23Peptidase_M14903158.80E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008270Molecular Functionzinc ion binding
GO:0004181Molecular Functionmetallocarboxypeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.710
SRR2545915Juvenile tuber16.910
SRP108465SRR5643513five period of Gastrodia elata12.450
SRR5643514five period of Gastrodia elata11.470
SRR5643515five period of Gastrodia elata12.600
SRR5643524five period of Gastrodia elata12.060
SRR5643525five period of Gastrodia elata12.020
SRR5643528five period of Gastrodia elata15.700
SRR5643658five period of Gastrodia elata13.330
SRR5643659five period of Gastrodia elata14.310
SRR5643660five period of Gastrodia elata16.350
SRR5643661five period of Gastrodia elata16.840
SRR5643662five period of Gastrodia elata15.610
SRR5643663five period of Gastrodia elata16.660
SRR5643664five period of Gastrodia elata17.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.340
SRR6049655Rhizomagastrodiae_C368-T10_good_112.300
SRR6049656Rhizomagastrodiae_C368-T07_good_113.800
SRR6049657Rhizomagastrodiae_C368-T07_good_118.780
SRR6049658Rhizomagastrodiae_C368-T04_good_118.990
SRR6049659Rhizomagastrodiae_C368-T04_good_117.570
SRR6049660Rhizomagastrodiae_C368-T01_good_114.380
SRR6049661Rhizomagastrodiae_C368-T04_good_116.590
SRR6049662Rhizomagastrodiae_C368-T01_good_113.940
SRR6049663Rhizomagastrodiae_C368-T01_good_114.140
SRR6049664Rhizomagastrodiae_C368-T10_good_116.190
SRR6049665Rhizomagastrodiae_C368-T10_good_116.190
SRP279888GastroGastrodia elata tuber 17.39
JuvenJuvenile tuber13.19
Mother_GastroMother tuber of Gastrodia elata 34.93
Mother_JuvenMother tuber of Juvenile 25.50