Detail information of GWHGAAEX005122/evm.TU.scaffold_16.61


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262195395|ref|YP_003266604.1|5.00E-11peptidoglycan-binding lysin domain-containing protein [Haliangium ochraceum DSM 14365]
nrgi|672116212|ref|XP_008781263.1|7.04E-128PREDICTED: chitin elicitor-binding protein [Phoenix dactylifera]
Swissprottr|Q8H8C7|CEBIP_ORYSJ2.00E-81Chitin elicitor-binding protein (Precursor)
trEMBLtr|M0SAM3|M0SAM3_MUSAM5.00E-122Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P00550_001}
TAIRAT2G171205.00E-66lysm domain GPI-anchored protein 2 precursor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002419791622001825-
Transcript Sequence

Network for GWHGAAEX005122

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01476.19LysM1061524.30E-11
PF01476.19LysM1722135.50E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.640
SRR2545915Juvenile tuber9.260
SRP108465SRR5643513five period of Gastrodia elata33.220
SRR5643514five period of Gastrodia elata33.210
SRR5643515five period of Gastrodia elata29.260
SRR5643524five period of Gastrodia elata30.120
SRR5643525five period of Gastrodia elata21.470
SRR5643528five period of Gastrodia elata28.710
SRR5643658five period of Gastrodia elata22.200
SRR5643659five period of Gastrodia elata10.760
SRR5643660five period of Gastrodia elata5.620
SRR5643661five period of Gastrodia elata9.360
SRR5643662five period of Gastrodia elata3.680
SRR5643663five period of Gastrodia elata4.540
SRR5643664five period of Gastrodia elata3.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.940
SRR6049655Rhizomagastrodiae_C368-T10_good_145.690
SRR6049656Rhizomagastrodiae_C368-T07_good_136.660
SRR6049657Rhizomagastrodiae_C368-T07_good_129.650
SRR6049658Rhizomagastrodiae_C368-T04_good_125.720
SRR6049659Rhizomagastrodiae_C368-T04_good_123.490
SRR6049660Rhizomagastrodiae_C368-T01_good_127.810
SRR6049661Rhizomagastrodiae_C368-T04_good_127.240
SRR6049662Rhizomagastrodiae_C368-T01_good_142.660
SRR6049663Rhizomagastrodiae_C368-T01_good_128.720
SRR6049664Rhizomagastrodiae_C368-T10_good_146.460
SRR6049665Rhizomagastrodiae_C368-T10_good_146.460
SRP279888GastroGastrodia elata tuber 8.06
JuvenJuvenile tuber14.66
Mother_GastroMother tuber of Gastrodia elata 10.97
Mother_JuvenMother tuber of Juvenile 7.50