Detail information of GWHGAAEX005126/evm.TU.scaffold_16.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|115477657|ref|NP_001062424.1|6.52E-118Os08g0546900 [Oryza sativa Japonica Group]
trEMBLtr|Q0J3X7|Q0J3X7_ORYSJ2.00E-118Os08g0546900 protein {ECO:0000313|EMBL:BAF24338.1}
TAIRAT1G01220_21.00E-70Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002422229152236840+
Transcript Sequence

Network for GWHGAAEX005126

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04970.12LRAT121637.50E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.530
SRR2545915Juvenile tuber21.710
SRP108465SRR5643513five period of Gastrodia elata43.900
SRR5643514five period of Gastrodia elata34.580
SRR5643515five period of Gastrodia elata34.200
SRR5643524five period of Gastrodia elata33.470
SRR5643525five period of Gastrodia elata31.220
SRR5643528five period of Gastrodia elata22.840
SRR5643658five period of Gastrodia elata28.010
SRR5643659five period of Gastrodia elata40.880
SRR5643660five period of Gastrodia elata46.750
SRR5643661five period of Gastrodia elata48.730
SRR5643662five period of Gastrodia elata120.070
SRR5643663five period of Gastrodia elata81.790
SRR5643664five period of Gastrodia elata121.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.130
SRR6049655Rhizomagastrodiae_C368-T10_good_141.990
SRR6049656Rhizomagastrodiae_C368-T07_good_141.480
SRR6049657Rhizomagastrodiae_C368-T07_good_138.940
SRR6049658Rhizomagastrodiae_C368-T04_good_126.650
SRR6049659Rhizomagastrodiae_C368-T04_good_126.700
SRR6049660Rhizomagastrodiae_C368-T01_good_122.090
SRR6049661Rhizomagastrodiae_C368-T04_good_127.890
SRR6049662Rhizomagastrodiae_C368-T01_good_137.010
SRR6049663Rhizomagastrodiae_C368-T01_good_122.480
SRR6049664Rhizomagastrodiae_C368-T10_good_145.100
SRR6049665Rhizomagastrodiae_C368-T10_good_145.100
SRP279888GastroGastrodia elata tuber 40.63
JuvenJuvenile tuber33.35
Mother_GastroMother tuber of Gastrodia elata 25.22
Mother_JuvenMother tuber of Juvenile 27.79