Detail information of GWHGAAEX005130/evm.TU.scaffold_16.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695071208|ref|XP_009382665.1|0PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q689D6|RPD1_ARATH1.00E-157Protein ROOT PRIMORDIUM DEFECTIVE 1
trEMBLtr|M0RQ02|M0RQ02_MUSAM8.00E-176Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P06720_001}
TAIRAT4G33500_22.00E-152Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002423441982345511+
Transcript Sequence

Network for GWHGAAEX005130

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11955.7PORR353781.30E-93
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.460
SRR2545915Juvenile tuber6.510
SRP108465SRR5643513five period of Gastrodia elata10.260
SRR5643514five period of Gastrodia elata6.480
SRR5643515five period of Gastrodia elata8.610
SRR5643524five period of Gastrodia elata3.610
SRR5643525five period of Gastrodia elata12.360
SRR5643528five period of Gastrodia elata8.490
SRR5643658five period of Gastrodia elata14.000
SRR5643659five period of Gastrodia elata8.750
SRR5643660five period of Gastrodia elata12.510
SRR5643661five period of Gastrodia elata9.420
SRR5643662five period of Gastrodia elata13.080
SRR5643663five period of Gastrodia elata11.720
SRR5643664five period of Gastrodia elata10.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.040
SRR6049655Rhizomagastrodiae_C368-T10_good_113.850
SRR6049656Rhizomagastrodiae_C368-T07_good_17.710
SRR6049657Rhizomagastrodiae_C368-T07_good_110.790
SRR6049658Rhizomagastrodiae_C368-T04_good_16.230
SRR6049659Rhizomagastrodiae_C368-T04_good_16.330
SRR6049660Rhizomagastrodiae_C368-T01_good_16.850
SRR6049661Rhizomagastrodiae_C368-T04_good_15.340
SRR6049662Rhizomagastrodiae_C368-T01_good_15.400
SRR6049663Rhizomagastrodiae_C368-T01_good_14.550
SRR6049664Rhizomagastrodiae_C368-T10_good_110.250
SRR6049665Rhizomagastrodiae_C368-T10_good_110.250
SRP279888GastroGastrodia elata tuber 5.62
JuvenJuvenile tuber25.47
Mother_GastroMother tuber of Gastrodia elata 6.34
Mother_JuvenMother tuber of Juvenile 23.22