Detail information of GWHGAAEX005132/evm.TU.scaffold_16.74


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|32471474|ref|NP_864467.1|2.00E-22serine/threonine-protein kinase pknA [Rhodopirellula baltica SH 1]
KOGKOG06580Glycogen synthase kinase-3
nrgi|719998745|ref|XP_010255498.1|0PREDICTED: shaggy-related protein kinase epsilon isoform X1 [Nelumbo nucifera]
Swissprottr|Q96287|KSG8_ARATH0Shaggy-related protein kinase theta
trEMBLtr|A0A067HDN9|A0A067HDN9_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO86032.1}
TAIRAT4G007200shaggy-like protein kinase 32

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002423557642363528+
Transcript Sequence

Network for GWHGAAEX005132

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase843684.30E-65
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_GSK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.130
SRR2545915Juvenile tuber10.430
SRP108465SRR5643513five period of Gastrodia elata9.410
SRR5643514five period of Gastrodia elata7.450
SRR5643515five period of Gastrodia elata11.010
SRR5643524five period of Gastrodia elata0.740
SRR5643525five period of Gastrodia elata11.600
SRR5643528five period of Gastrodia elata8.460
SRR5643658five period of Gastrodia elata13.630
SRR5643659five period of Gastrodia elata3.090
SRR5643660five period of Gastrodia elata5.320
SRR5643661five period of Gastrodia elata4.480
SRR5643662five period of Gastrodia elata4.590
SRR5643663five period of Gastrodia elata5.480
SRR5643664five period of Gastrodia elata4.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.390
SRR6049655Rhizomagastrodiae_C368-T10_good_19.380
SRR6049656Rhizomagastrodiae_C368-T07_good_15.210
SRR6049657Rhizomagastrodiae_C368-T07_good_16.940
SRR6049658Rhizomagastrodiae_C368-T04_good_12.850
SRR6049659Rhizomagastrodiae_C368-T04_good_12.130
SRR6049660Rhizomagastrodiae_C368-T01_good_12.990
SRR6049661Rhizomagastrodiae_C368-T04_good_11.930
SRR6049662Rhizomagastrodiae_C368-T01_good_13.510
SRR6049663Rhizomagastrodiae_C368-T01_good_13.780
SRR6049664Rhizomagastrodiae_C368-T10_good_19.210
SRR6049665Rhizomagastrodiae_C368-T10_good_19.210
SRP279888GastroGastrodia elata tuber 4.75
JuvenJuvenile tuber20.05
Mother_GastroMother tuber of Gastrodia elata 13.54
Mother_JuvenMother tuber of Juvenile 26.27