Detail information of GWHGAAEX005152/evm.TU.scaffold_16.101


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672131916|ref|XP_008789525.1|1.33E-50PREDICTED: auxin-responsive protein IAA10-like [Phoenix dactylifera]
Swissprottr|Q38829|IAA11_ARATH3.00E-41Auxin-responsive protein IAA11
trEMBLtr|M0U844|M0U844_MUSAM7.00E-47Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIRAT4G286409.00E-41indole-3-acetic acid inducible 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002431084683132518-
Transcript Sequence

Network for GWHGAAEX005152

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.15AUX_IAA852572.60E-47
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.050
SRR2545915Juvenile tuber24.510
SRP108465SRR5643513five period of Gastrodia elata20.460
SRR5643514five period of Gastrodia elata18.970
SRR5643515five period of Gastrodia elata15.440
SRR5643524five period of Gastrodia elata17.340
SRR5643525five period of Gastrodia elata20.590
SRR5643528five period of Gastrodia elata15.750
SRR5643658five period of Gastrodia elata16.030
SRR5643659five period of Gastrodia elata17.010
SRR5643660five period of Gastrodia elata20.340
SRR5643661five period of Gastrodia elata18.710
SRR5643662five period of Gastrodia elata18.920
SRR5643663five period of Gastrodia elata22.080
SRR5643664five period of Gastrodia elata22.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.100
SRR6049655Rhizomagastrodiae_C368-T10_good_117.630
SRR6049656Rhizomagastrodiae_C368-T07_good_120.140
SRR6049657Rhizomagastrodiae_C368-T07_good_123.060
SRR6049658Rhizomagastrodiae_C368-T04_good_125.310
SRR6049659Rhizomagastrodiae_C368-T04_good_127.560
SRR6049660Rhizomagastrodiae_C368-T01_good_123.860
SRR6049661Rhizomagastrodiae_C368-T04_good_120.750
SRR6049662Rhizomagastrodiae_C368-T01_good_116.470
SRR6049663Rhizomagastrodiae_C368-T01_good_117.620
SRR6049664Rhizomagastrodiae_C368-T10_good_117.460
SRR6049665Rhizomagastrodiae_C368-T10_good_117.460
SRP279888GastroGastrodia elata tuber 27.22
JuvenJuvenile tuber32.85
Mother_GastroMother tuber of Gastrodia elata 24.08
Mother_JuvenMother tuber of Juvenile 29.52