Detail information of GWHGAAEX005161/evm.TU.scaffold_16.112


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|46446430|ref|YP_007795.1|6.00E-37tonoplast intrinsic protein (Aquaporin) [Candidatus Protochlamydia amoebophila UWE25]
KOGKOG02233.00E-125Aquaporin (major intrinsic protein family)
nrgi|406657706|gb|AFS50011.1|4.23E-141hypothetical protein [Dendrobium catenatum]
Swissprottr|P50156|TIP11_ORYSJ1.00E-132Probable aquaporin TIP1-1
trEMBLtr|J9Z234|J9Z234_9ASPA2.00E-141Uncharacterized protein {ECO:0000313|EMBL:AFS50011.1}
TAIRAT2G368303.00E-125gamma tonoplast intrinsic protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002435388533540373+
Transcript Sequence

Network for GWHGAAEX005161

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP172331.90E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms86.550
SRR2545915Juvenile tuber155.990
SRP108465SRR5643513five period of Gastrodia elata174.630
SRR5643514five period of Gastrodia elata138.630
SRR5643515five period of Gastrodia elata105.210
SRR5643524five period of Gastrodia elata95.350
SRR5643525five period of Gastrodia elata1784.930
SRR5643528five period of Gastrodia elata628.310
SRR5643658five period of Gastrodia elata1732.850
SRR5643659five period of Gastrodia elata438.340
SRR5643660five period of Gastrodia elata480.090
SRR5643661five period of Gastrodia elata328.740
SRR5643662five period of Gastrodia elata746.980
SRR5643663five period of Gastrodia elata1011.150
SRR5643664five period of Gastrodia elata845.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1339.100
SRR6049655Rhizomagastrodiae_C368-T10_good_1246.170
SRR6049656Rhizomagastrodiae_C368-T07_good_1338.970
SRR6049657Rhizomagastrodiae_C368-T07_good_1392.370
SRR6049658Rhizomagastrodiae_C368-T04_good_1184.980
SRR6049659Rhizomagastrodiae_C368-T04_good_1157.040
SRR6049660Rhizomagastrodiae_C368-T01_good_1262.470
SRR6049661Rhizomagastrodiae_C368-T04_good_1405.170
SRR6049662Rhizomagastrodiae_C368-T01_good_1308.660
SRR6049663Rhizomagastrodiae_C368-T01_good_1141.850
SRR6049664Rhizomagastrodiae_C368-T10_good_1450.310
SRR6049665Rhizomagastrodiae_C368-T10_good_1450.310
SRP279888GastroGastrodia elata tuber 862.30
JuvenJuvenile tuber100.13
Mother_GastroMother tuber of Gastrodia elata 10.14
Mother_JuvenMother tuber of Juvenile 34.08