Detail information of GWHGAAEX005169/evm.TU.scaffold_16.120


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27142.00E-137SETA binding protein SB1 and related proteins, contain BTB/POZ domain
nrgi|720063388|ref|XP_010275635.1|3.56E-162PREDICTED: BTB/POZ domain-containing protein At5g41330 [Nelumbo nucifera]
Swissprottr|Q9FN67|Y5133_ARATH6.00E-138BTB/POZ domain-containing protein At5g41330
trEMBLtr|A0A0A0KK80|A0A0A0KK80_CUCSA1.00E-154Uncharacterized protein {ECO:0000313|EMBL:KGN50085.1}
TAIRAT5G413302.00E-137BTB/POZ domain with WD40/YVTN repeat-like protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002437047713706144+
Transcript Sequence

Network for GWHGAAEX005169

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02214.21BTB_224988.20E-11
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0051260Biological Processprotein homooligomerization
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.910
SRR2545915Juvenile tuber5.190
SRP108465SRR5643513five period of Gastrodia elata17.150
SRR5643514five period of Gastrodia elata13.320
SRR5643515five period of Gastrodia elata16.040
SRR5643524five period of Gastrodia elata15.260
SRR5643525five period of Gastrodia elata15.830
SRR5643528five period of Gastrodia elata22.900
SRR5643658five period of Gastrodia elata14.560
SRR5643659five period of Gastrodia elata21.870
SRR5643660five period of Gastrodia elata25.880
SRR5643661five period of Gastrodia elata26.180
SRR5643662five period of Gastrodia elata24.200
SRR5643663five period of Gastrodia elata19.930
SRR5643664five period of Gastrodia elata21.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.440
SRR6049655Rhizomagastrodiae_C368-T10_good_132.000
SRR6049656Rhizomagastrodiae_C368-T07_good_124.020
SRR6049657Rhizomagastrodiae_C368-T07_good_123.150
SRR6049658Rhizomagastrodiae_C368-T04_good_132.020
SRR6049659Rhizomagastrodiae_C368-T04_good_131.600
SRR6049660Rhizomagastrodiae_C368-T01_good_124.990
SRR6049661Rhizomagastrodiae_C368-T04_good_123.770
SRR6049662Rhizomagastrodiae_C368-T01_good_125.630
SRR6049663Rhizomagastrodiae_C368-T01_good_132.030
SRR6049664Rhizomagastrodiae_C368-T10_good_130.770
SRR6049665Rhizomagastrodiae_C368-T10_good_130.770
SRP279888GastroGastrodia elata tuber 22.86
JuvenJuvenile tuber21.98
Mother_GastroMother tuber of Gastrodia elata 52.45
Mother_JuvenMother tuber of Juvenile 47.69