Detail information of GWHGAAEX005172/evm.TU.scaffold_16.124


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672127908|ref|XP_008787433.1|1.49E-58PREDICTED: uncharacterized protein At1g76660 [Phoenix dactylifera]
Swissprottr|Q9SRE5|Y1666_ARATH3.00E-25Uncharacterized protein At1g76660
trEMBLtr|M0RXM9|M0RXM9_MUSAM1.00E-56Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P06710_001}
TAIRAT5G524304.00E-38hydroxyproline-rich glycoprotein family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002437580893760136+
Transcript Sequence

Network for GWHGAAEX005172

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.750
SRR2545915Juvenile tuber14.590
SRP108465SRR5643513five period of Gastrodia elata56.580
SRR5643514five period of Gastrodia elata35.720
SRR5643515five period of Gastrodia elata68.290
SRR5643524five period of Gastrodia elata44.480
SRR5643525five period of Gastrodia elata215.870
SRR5643528five period of Gastrodia elata288.960
SRR5643658five period of Gastrodia elata161.040
SRR5643659five period of Gastrodia elata14.570
SRR5643660five period of Gastrodia elata21.190
SRR5643661five period of Gastrodia elata17.540
SRR5643662five period of Gastrodia elata61.290
SRR5643663five period of Gastrodia elata14.840
SRR5643664five period of Gastrodia elata56.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_154.830
SRR6049655Rhizomagastrodiae_C368-T10_good_134.020
SRR6049656Rhizomagastrodiae_C368-T07_good_133.310
SRR6049657Rhizomagastrodiae_C368-T07_good_163.760
SRR6049658Rhizomagastrodiae_C368-T04_good_190.520
SRR6049659Rhizomagastrodiae_C368-T04_good_1119.430
SRR6049660Rhizomagastrodiae_C368-T01_good_157.860
SRR6049661Rhizomagastrodiae_C368-T04_good_181.880
SRR6049662Rhizomagastrodiae_C368-T01_good_124.010
SRR6049663Rhizomagastrodiae_C368-T01_good_140.700
SRR6049664Rhizomagastrodiae_C368-T10_good_125.650
SRR6049665Rhizomagastrodiae_C368-T10_good_125.650
SRP279888GastroGastrodia elata tuber 33.88
JuvenJuvenile tuber41.71
Mother_GastroMother tuber of Gastrodia elata 834.00
Mother_JuvenMother tuber of Juvenile 927.59