Detail information of GWHGAAEX005178/evm.TU.scaffold_16.130


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672140921|ref|XP_008794275.1|1.59E-126PREDICTED: uncharacterized protein LOC103710367 isoform X2 [Phoenix dactylifera]
trEMBLtr|M0U9X8|M0U9X8_MUSAM2.00E-121Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP17190_001}
TAIRAT1G193301.00E-71Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002439312293933235-
Transcript Sequence

Network for GWHGAAEX005178

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13867.5SAP30_Sin3_bdg1662194.60E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.390
SRR2545915Juvenile tuber24.230
SRP108465SRR5643513five period of Gastrodia elata15.880
SRR5643514five period of Gastrodia elata16.840
SRR5643515five period of Gastrodia elata11.900
SRR5643524five period of Gastrodia elata17.000
SRR5643525five period of Gastrodia elata2.200
SRR5643528five period of Gastrodia elata1.170
SRR5643658five period of Gastrodia elata2.740
SRR5643659five period of Gastrodia elata16.370
SRR5643660five period of Gastrodia elata12.510
SRR5643661five period of Gastrodia elata11.790
SRR5643662five period of Gastrodia elata5.220
SRR5643663five period of Gastrodia elata8.030
SRR5643664five period of Gastrodia elata6.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.050
SRR6049655Rhizomagastrodiae_C368-T10_good_116.260
SRR6049656Rhizomagastrodiae_C368-T07_good_122.160
SRR6049657Rhizomagastrodiae_C368-T07_good_114.290
SRR6049658Rhizomagastrodiae_C368-T04_good_113.480
SRR6049659Rhizomagastrodiae_C368-T04_good_19.230
SRR6049660Rhizomagastrodiae_C368-T01_good_117.760
SRR6049661Rhizomagastrodiae_C368-T04_good_118.420
SRR6049662Rhizomagastrodiae_C368-T01_good_128.230
SRR6049663Rhizomagastrodiae_C368-T01_good_117.110
SRR6049664Rhizomagastrodiae_C368-T10_good_120.500
SRR6049665Rhizomagastrodiae_C368-T10_good_120.500
SRP279888GastroGastrodia elata tuber 3.79
JuvenJuvenile tuber20.01
Mother_GastroMother tuber of Gastrodia elata 11.59
Mother_JuvenMother tuber of Juvenile 6.42