Gene detail

Detail information of GWHGAAEX005180/evm.TU.scaffold_16.132

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672140925\|ref\|XP_008794279.1\|	PREDICTED: uncharacterized protein LOC103710369 [Phoenix dactylifera]
trEMBL	tr\|M0RW41\|M0RW41_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P01330_001}
TAIR	AT2G46060	transmembrane protein-related

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000024	4005664	4086500	-

Transcript Sequence
>GWHTAAEX005180 AAATTATCTTGGCACGTAAATCTGAATAGCTCGCTCTCACAGCCATCGTTTCACGGCCAGCCTCATATACTCATCGTGCCGCAGATACTGGAATTTTGGGGATAATACCAGAGATCTTTTTCTCTCTTTTGCTCTTCGCGCGCTTTCCAGTGCTGCTTGGGATTACTTTGATAGCCTTCGCTTTCCGAAAAACCAAAGGTAAAGAAAAAAGGAACTCTGGATAGGGTTCAGACCTTCCAACGAAGGATCTCCTTCTCTTTAGGCTGGCTCATGGGTGCTTCCGATTCTCTTCGTACCTTTTGGATTCTGTTTCTTTTCACGTGGACGTTGGCGACGGGGCAAGTACAGGGGCAGCAGAGTTCCTCCACGATTTGGAGCTTTAGCCGCCCGGAGATATGGCTGAAGCCTTATGATTGGACTTATTTGAGAGTTGACGTTCCAAATTGGTTCTCATCCATAACTATGATCTTCACTTCGAGCTTTGGCATTGATAAGGAGCAACTTAAGAAAGTTCCGAAAAGCATGCTTCCAGTGATATGCTTCAATCAAGGCCGTCTGCCTCTTCCAGATGTTTCAGATACTTATTTGGACTCTTTATTGTCAAATTTTATGGCTAATGGAACTTTTGATGGCTCACAGTATCATCCCAATTTGGAGCAATGCATTCCGTTTCAGAAAAACCTAACAATTGCTCTGACCAAAGACAAGTTATCTCCAGGAGTATGGTACATTGGATTTTTTAATGGCCTTGGACCTGAACGCACTCAGTCCAAGATGATTAGTCGAGGGCATTCATACTTGCTCAGTGCTAGCATAAATGTGGAAGGTTGTGCTACTTCGACAAAATGGGGTGCTATCTGCAACAATACAGTTGATATAATTTCTTGTTCTCAATTTCTTAATTATAATCACCCTAGGACCCTTTTAGATGTTGATACGCACAAGAACAGGAATGTTTTGAACGCCAAATACGCTGCAGAAACTTTGCTCAGCTGTAACACTTCACTGATGTCATGCATTGGCAACGGAGAGCTAAAGTTCTACTCTTTTGATATAGTAGCTCCAACTAATCAGTTCACAATCACTGCTGCAGAGCTAATGCTGAATCAAACATTTGTATCAAACAGTTCGTCAGATTTTGAGGGAGTTCTTGTTATGTGCTATGCTCGATATAATGCAATGCCACTTAGTTCTTTATATGATCATTCTTCTGACATAAGCAGGACCCCCTTAATAGTTAACTCTCCAAAAATTGGACAGTGGTTTGTTGCACTGCAGCTTCTGATTCAGAAAACTGTAGATGAAGCATTGCAAGAAAACTTTTCTAAAGCGACTCTATGCTTTTCTTTGGAGTGGCAATTGTATCAGTGCCGTAATGGAAGGACTGGCCTAAACTGCTCCTGGGAATCATACATGCTTCAGAGAGTTATTAAAAAAGAATTAAGTGTTCCTGTACAGTCTTATTATCTTCCAGAAAGCAAATATGGGCCCTTGGAGGATTCAAAATTTCACCTTGATCATCTTTTAAGTAATTCTTCTATTGACAATGTTGCATGGACTTACTTCTTTTTGGAAGTTCCTCACGGTGCAGCTGGATCTAATCTCCATGTTCAATTAAGTACAGACAAGAATGTAGGCTATGAAATTTACACAAGATATGGCGGTGCAGCTTCTATTGATAATTGGGATTTTTATGTAAATAGCTCAAGTAATAGCAATGCATCAATGCTTGTGACATCAAATGACTTAAACAAAGGAAGAATAGAATTCTACCTTCTATATGTTCAGGAAGGAATTTGGAGTATTGGAGTGCGGCATACTGCAAGTATCGGTGAACACCAAAGTTCCATGTCCATTTCACTTGATTGGTGTCTCAAACATTGCTCTTCCAACGGACAATGTCATTATTCTTTAGATGAAAGTGGCTTGACATATTATAGCTATTGCATTTGTGACCGAAATCATGGAGGCTTTGATTGCAGTAATGAGCTTGTCTCACCTCAAGGACATATCTGGCATTCAATTTTTCTTGTTGCATCAAACGGAGCAGCTATTTTACCTGCATATTGGTCCCTCCGGCAGAAGGCATTCGCTGAATGGGTGCTTTATACTTCAAGCGGGATTTCAAGTGGGCTGTATCATGCATGTGACGTGGGAAGCTGGTGCGCTCTTTCTTTTCATGCACTTCAGTTTATGGACTTTTGGCTTTCATTCATGGCTGTGGTGAGCACGTTTGTATATATGGCTGCAATAAATGAGGCTTCAAAAAGAGCCATTCACACCTCAGTTGCCATTGTCACTGCTCTTCTAGCCGAAACTGATGCAACAAGGTCACAAAATGTTATCATTGTTATAACCATTGGCACTCTTGGTCTTCTTGTTGGATGGTTCCTAGAGTTTTCTACTGCTAATAGATCTTTGTGGCCACCAAGATTTGACTTTAACATGCTTCTTCATCGTTGGGAGAGTATTAGGATATGGAGCTGGAATTTAATTTTGACTCTGATAAAAAGATTCCGCTGGCCATTCATGTTTCTTGGTTTTCTGGGATTGGCTCTTGCTGGAACAAGCTGGATGTTAGAAACTAACAACAGCTACTGGTTTTGGCATAGCTTATGGCATGTCTCCATATACACGGCTTCATTCTTTTTCCTGTGCTCTATTTGTCCAAAGAATGATGAACTGCGACAGCCAGAATATGTGTTGACTCGGCAGAACTCGGCATCGAGAGAATAGTCGAATCTCTCAAGTTAGTTGAGGGCTTATGGGAAGTCGCCCCAGGTTGCCCTTCTGTATAGAGTTTCCCCAACATGAGCCAAACAATAAAAAATAAAAATATCAGAACCGTTGGATGGATGCCAGATGTTGTGTCAGAAACGTGGCATTAATCCAATTCTTATGGCAGCATAGTAGGGTTGCTCGTTTTGTATTTATGAACCAAATAGGTACACAGCCAAAGGAAATGAGTGCTATTTTGTGAATAACTTGTTGCACTGGACATTAAGAATTGTACAAAGTTGATTTAAAAAAATTTCGAATTTTGTTGTTGTAGAATGTTGCTCGACATTTAGTGACCTAATGTCATCAAATCAACGATATATTTGTAATTATTTTTTTCTTATTTATAATAACATTTGGTTTCACACAAAGCGGTT

Network for GWHGAAEX005180

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12036.7	DUF3522	580	785	2.40E-48

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	26.060
SRP064423	SRR2545915	Juvenile tuber	25.900
SRP108465	SRR5643513	five period of Gastrodia elata	14.520
	SRR5643514	five period of Gastrodia elata	15.690
	SRR5643515	five period of Gastrodia elata	16.500
	SRR5643524	five period of Gastrodia elata	15.240
	SRR5643525	five period of Gastrodia elata	25.470
	SRR5643528	five period of Gastrodia elata	20.810
	SRR5643658	five period of Gastrodia elata	26.250
	SRR5643659	five period of Gastrodia elata	14.580
	SRR5643660	five period of Gastrodia elata	17.240
	SRR5643661	five period of Gastrodia elata	15.420
	SRR5643662	five period of Gastrodia elata	21.250
	SRR5643663	five period of Gastrodia elata	18.910
	SRR5643664	five period of Gastrodia elata	23.740
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	16.700
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.710
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.570
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	20.200
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.420
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	20.380
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.760
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.230
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	15.270
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	16.550
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	16.550
SRP279888	Gastro	Gastrodia elata tuber	35.43
	Juven	Juvenile tuber	24.51
	Mother_Gastro	Mother tuber of Gastrodia elata	25.69
	Mother_Juven	Mother tuber of Juvenile	25.97