Detail information of GWHGAAEX005182/evm.TU.scaffold_16.134


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743776736|ref|XP_010918781.1|8.78E-47PREDICTED: uncharacterized protein LOC105043065 [Elaeis guineensis]
trEMBLtr|M0S501|M0S501_MUSAM2.00E-44Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P04100_001}
TAIRAT4G144201.00E-29HR-like lesion-inducing protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002441302484130795+
Transcript Sequence

Network for GWHGAAEX005182

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module9

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05514.10HR_lesion1773.30E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1395.720
SRR2545915Juvenile tuber694.550
SRP108465SRR5643513five period of Gastrodia elata738.050
SRR5643514five period of Gastrodia elata626.340
SRR5643515five period of Gastrodia elata765.090
SRR5643524five period of Gastrodia elata510.290
SRR5643525five period of Gastrodia elata1034.940
SRR5643528five period of Gastrodia elata948.770
SRR5643658five period of Gastrodia elata688.900
SRR5643659five period of Gastrodia elata1478.990
SRR5643660five period of Gastrodia elata1475.070
SRR5643661five period of Gastrodia elata1594.580
SRR5643662five period of Gastrodia elata2152.920
SRR5643663five period of Gastrodia elata2033.920
SRR5643664five period of Gastrodia elata2200.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11682.690
SRR6049655Rhizomagastrodiae_C368-T10_good_1405.650
SRR6049656Rhizomagastrodiae_C368-T07_good_11668.300
SRR6049657Rhizomagastrodiae_C368-T07_good_12023.610
SRR6049658Rhizomagastrodiae_C368-T04_good_12272.010
SRR6049659Rhizomagastrodiae_C368-T04_good_12765.750
SRR6049660Rhizomagastrodiae_C368-T01_good_11865.120
SRR6049661Rhizomagastrodiae_C368-T04_good_12016.070
SRR6049662Rhizomagastrodiae_C368-T01_good_11528.860
SRR6049663Rhizomagastrodiae_C368-T01_good_11917.770
SRR6049664Rhizomagastrodiae_C368-T10_good_11404.420
SRR6049665Rhizomagastrodiae_C368-T10_good_11404.420
SRP279888GastroGastrodia elata tuber 6,082.80
JuvenJuvenile tuber750.94
Mother_GastroMother tuber of Gastrodia elata 3,720.03
Mother_JuvenMother tuber of Juvenile 1,004.95