Gene detail

Detail information of GWHGAAEX005199/evm.TU.scaffold_16.158

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG3937	4.00E-125	mRNA splicing factor
nr	gi\|672172347\|ref\|XP_008806260.1\|	9.73E-162	PREDICTED: protein AAR2 homolog isoform X1 [Phoenix dactylifera]
trEMBL	tr\|M0RJS4\|M0RJS4_MUSAM	4.00E-153	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P19990_001}
TAIR	AT1G66510	4.00E-125	AAR2 protein family

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000024	4889795	4998090	-

Transcript Sequence
>GWHTAAEX005199 GTCGGGATGAGTGAGTTTATTGGGTCCTGGATTCAGAAACCGCGGGGGTGAGGAAGCATGGCTACCGGCCTGGATTCAGAGGCCGCGCTTAAGCTGGTAAAAAATGGCGGAACTCTTATTCTGCTCGATGTTCCCCAGTTCACACTCTTTGGCATTGACACCCAGGTCATTAAATGAAGCAAATAGCACACAGAATTGTGTCAAAAGAAGCATATCTTACAAAACTTTGAGACGTATGTTTTCTGTGGGGCCAAACTTTCAAGGTATAAAGATGCTTCCTCCAGGGCTGCATTTTGTCTACTATAGTTCCTCAAACAAGGAAGGACACGGGTTTTCTCCAACTACAAGTTTTTTCCTTACCATACACCCTTGTGAGGTAGTTGTTCGTAAATGGTGTAGACATGATGAACAATTGATCAATGTTTCAGAAGATGAAGAATGCATGTATTTTGAAATGGTGAAAAGGATGGAATTCGATCAGCATCTTGGACCATATCCTTTGGATCATTATGGAAACTGGAAACGTCTATCTTGCTACATTTCAACTAGTACAATTTCACGGATTGAATCTGCTGTGGCAAAGGCTGCTGTAGCACATGAATCTGTTTTACTTAACCAAGAGAAAAATGTTGAAATGGAAAAGGGGTTAGTGATGCAATTAAAGAATAGTAATCTTTTCGAGTGTTCTTCAGAAAAAACCAGGAAACGAGGATGCTTCTTTACAAGTATTCCCAAAGTTGTTAAGCACAAGAACATCACTGGTGAAGAGCTCACTTCCTTAAACCTTGATAAATCAAAGTTACTAGATAACATTCTCAGGAGAAACTTTGGAGGTGAAGAAGATCTTATTCTAGGAGAGCTGCAGTTTTCTTTTATTGCATTCACGATGGGGCAATCATGGGAAGCTTTTATCCAGTGGAAAGATCTTGTATGCCTTTTTTTCAGTTGTATTGAGGCACCACTTCGGACCAGGAGTCAGTTTTTTACGAAGGTGATTAGAGTGGTCTATTTCCAGCTAAAGCATGGTTTTGCAAAGGAGAAGGAGAGCTGTGATGATAACGGACCATCCCTATTTCTGGATGACGATTGGTTTTCTACCGATATTTTTCTGTATCGACTCTCCAAGGATTTCTTTCCGTTGGTGTTGGATGCTGAAGTTATAGATGGAGACCTTTTGTTATGGACAAGGAGACTCAAGAAATTTCTTGAAACCACTTTAGGGTGGGATTTTATGGACGGCCATATGAATGCCATGTGGGATGAAGATGATGAGTATGCTCCTGTTGTGGTGCCTTTAAATGAGACAATCCCAATGCTGCCGATGACATGAAAGAAAGTCCGGACTTCACAATGTAAAAAATCAGGTTAGCAAATCGGATTTAACTTGTGTGTTTACTGTTTGAATTAAAATAAAAAAACCGGGACTTCACAGTGTAAAAATTCAGGTTAGCAAATAGGATTTAACTTGTGGTTTTACTGTCTGAATTAAAATAAAAAAGCTATCGAATGTTACCAAAGGCAATCGACTTAAAGTTGGTATTTTTCTAAAGATGCGTTGCCTTTTATGTTACTACTGCTGGTGAGCAGTTGCTGCTGGCAAAAGCAATTTTGGCTGCCTTTCCCCCCTGCATTGATGCCTGCTATAGAGCTAACTGCACTTGCGAAACTATTCAACTTATTATGAAGAATGGAATAGCAATTTAATGTTAATAATAAAAATAAAATGTCCTGACATAGTGGATAATTTATCAATTGCCTATTATTAAAGAAGGCAACTGAGGACACTCATAGTTAAGTTATTAGGTGCCCCGGGATCTAGAATTGAGGAAAAATGAGGAGAATTAAAGTATAAACATCCAAATTATGCAATCAACTGCTACGGGAATTTAATTTAATTTCATCCAAAATATACATTAATACTACAAAATCATACTAATGTTACAATACACAATAAAAGTTTTAAACCACCTATTTTAAATCCAAAATCCTACTAATTACATCAACATAATATTAACAAAATTTTATCATAATACACCTCTAGGTGTTTCTATCAGAGCGCTTCATTCAAAACTTCAGTTATCACGATACTACACCTAAAAATTATTAGGTACTAACACCTGTCAAAAAAGAGTACATAGAAATCTAACATGTTTATAAATTCTTTTCATGCCAATCATTATTTCTAGTTTTGCAAGTAGCAGTGTTTTGATAGCATTTTTAAATTCTCAATAAGGTATGCAATAGACAAGGGAATATGAAGCAATCTAAGGGGTCAAGTACAACAAGTGTATATGGCTTTACATGAAATAGAAATAGCACATTCTAAGTGCATTATTGATGTGGATTCAACTAGGAAACAGAGTTGTAAGATCAATTCTTGTTCAATGAAATTTTTTATTGAACATACATACTAACCGATAAATCATTTCAGTAATATGATTTTTATGTCTGAATAGCAGTATTCTTTTTCTTATTGTAATTGTTAGTCTATTGTCTGAAATTTCTCAAGTTATGCTTGTGAGTCCATCCATGTTTGAACTTTATACCCTTGCCTTTATCTAGGAATTCATACCCATATGCCCCAAGTATGGATTCAAACCCTACTTGTCTCTTTAGGAATTCATACTTAGCTCATCAACTTCCAAGTAAGGTTTTACGCCACCCATCGGTAATGCTCTCATAAAACAATGAGTCTTATCACAAACAGGTCAATACCCTTTTCTCAGATCAGATGACCCTCCTTATCTCATTGTGTTGATGGCATTGTTTGTACAAGCACTCAAAGAAAAAAAATGGAGGTACATCACTCACTAATACTGCTCACAAATTCATTCATTGATTAATTTCTCTTTTTTTTAATAGGCCATAACAAAATACTAGTCATTCCCATGCAAAATAGCAATAACAATATCACACGGCCGCTTTCAAAATCTCCACTTATGTATGGTAAGTTTACATGCCTAAATATAACAAGAAAGAACTCACTTGCAATAATGATTCAATGCTTCTCATTCTAATACAATTCACATGCTATGTGAGGTAATTTTATAAGCATATAAACATTATGGATTGCACTTAAATGATCATAGAGTTTAAGTTTGTAGGCATTCTACCCAACTTGTTCAAAATCTCAAATAATTCAATAAATTGAGAACTAAACTATTTTACTATTCTAAAGAAACTGATGCCTTTTAAAGTGCTTACGGTCACATATACAAAATATATTGTCAAATTTTGCTTTACGATGTTTGGAATCAAAGTACTTCTTATGCATGTCTTGTGTTATCCATAGCTTGACTTGAATAAGTTTGACTTTTGTAGCAGCAGCATCAACCATGTCTAAGCCAAATAATTGGCTGCCACCTACGTTTTTTCAAGCAATATATGTAGTAAACCATCTTTCATACAACACTTCATAAGGCACTACCCCAATACTGGATTGGTAGGTGTTATTCTACTAAAGGTAGATGCTCATCCCAACTATCTCCAAAATCTATGATGCAAAGATGAAGTGAATCCTCAAGAATCTGATATGATTTGATATTATTTGCCATCAGTATGGGGATGAAAGTTTGCACTCAAATATAGCTTGGGTCTCAATTCTACTTGAATGGTGCGCCAAACTTCAATGTGAGCCGAATTTCAATATGATTACTTCCTTTAGATGCTTGGCAACTATATTTGTTTGGTGAATAGAAAATATTATTAGATTTAGTAAGATGCTCTGCAATCACCCAAATAGAATCATTTCCCAACATGGATCGGGGACACCCATAACAAATCCTTGGGGATATCTTGTCACTTTTACTTTGGAATTGGAACTAGTTGAAGTAGCCCTTTTGGTTTATGATGTTTTGCCTTGACCAAATTGCAAACCTCACATCTAGCTACAAATTGTCCTACTTCCTTTGTAAATATTGGCTGCCAAAATAGTGTCTTCAAATTTTTGTACATTTTGGTAACACTTGGTGAATGGTATGCCCTACATTATGAGCTTCTAACAAAATAGTATTTTGTAGCTCTGGATCATTTGGTATTTGCAATTTATTTTCTTGGTATATAACATCAAGCCAGAGTTCTATTCCAGATTCTGTCGTACTGAAGTTATTAAAGATTCATACTGCTATTTTCCTTTTGTGCTATTTTAATATGTTTTTCAAGAGAAACTTGTAGTGATAGTTGGTTTAGAATTACCTTAGTCGATTCTTTGATAACAGCTTCCAATCTAGTTTCTCTATCTCCTAATAACTGCATTTACCAAAGTTAATTGATGTAAATTATGGAGGATTTTCTGCTCAATGCATCAATTATCATATTGGCTCTTTCATGGTGGTATTAAATGTTTAAATCATAATTTTTATAAGTTATTGTAGATTTAGTTCTTTCTAAGTGAATATGTATTTAAGGCTTTGATAATCTATGAAAATTTAACATCTAGCCCCATAGAGAATATCTTTAAATTTCATGTGCAAAAATAATTGCTGCCAATACTTAATCATATACTATAATTTTTTCTGATGTAATTGGCTAGATGCGTATGTGATAGCATGTCCTTGCACGAATACCATCATAGCCCACAAAGTGAAACATTGTTGAAAAGTTGATAATCTTTCTCTCTTATTTGAAGTGCATGAACAAGTGCATCAGTTTAACAATTCTTTAACTATTGAAAGGTTAACTTTCTTCTAGGTTAATCTTGTTATTGGAGCTACTATATGAGAAATTCCCTTTATAAAATTTTGATAATGCTCATCTAGTCCCAAAAAACCTTATATTTCAATTACAAAAGTCATATGTGATCATTCACGTATATTACTGACCTTATGACCAATTGAAATTCCTTCCATCCAACTATATGACCCAAGAATGATATTGATTTTAACTAGAATTAAAATTTAGAATACTCAACACACATTGATGGCTTTTAAGAGTAATACAATTCTCAAATGTTCTGCATATTCTCTTTTAATCTTTCAATAAGGATATTGTCAATGAATATAATAATTCTCCTATCTAAATAAAGTTTCAGGATTTGGTGCATTACTTCTATAAAAATAGATGGAGCGATCACATGATTAGATATTCAAAATGTCCATAATGGATTCAAATTGCTGATATAGGGATATGCTTTTCTTTTATCTGGAGAAGGTCAATTTTCAAAAGGACTATTGCTCTCTCTAGTTGATCAAATAAAGCATCAAATCTCATAAGATGATACTTATTTTTAATGATGAATTTATTTAATTTTCAGTAGTCACAAATAGCAACGACACTCTCCAAGTCGAAGTGCTAGGATGAATAAAGCCACAATCTGTTAGCTCTTGTATCTTCTATATAAATTTTTGGAGTTCTTTTAGAGCTATACAGCACGGTGTTTTTAGAATAGGAGAAACTTCATGCAATAAATTGATAGAGAACTCAATCTCATGAGCTGATGGCAATTCTGGGAGATCCTCAAGAAAGACTTCTGAGAATTCAAAGACAATAGGGGTATCTTCCAATCTCTTAACAAGTTCATAGGCCTCTAATATAAAAACTTATTAGCATTAAAAAACAAGATTAAACAAAAAATATTTCCTTGCAGCCTACAAAAGCAATTTAACTTCTTTTGAACCGATCTGAACATTCTTCTGAAAATCTATAATAATACTCTATTTGTTCATCGAGTTCACAACAAGCACAACATCGAACGTTATAATCGGAAGAATAATAAAATCAACTTCTAGGAGTCTACTGTTAATATTTAAATTGCAGGTACGTAGCCGCTCTTAAACTATCACAAACCCACAATCATATGACTAGATAATTCATTTATGGTTAAATTGAGTGTAGCAGCTCGTGAAGCAGATATGAAAGAGTGGCTGACACCATAATCAAATAAAATTATAGCAATTTGATGAATAAGAATAGTACAAGTATCCACGTGTAGTGTAGCACCAGTTTCTGCAGTAGTCAAATTAAAAATTATGGTATGGGTAGGTATTCTTGCCGTAGGCATGGGTACATTGGTTTTGCCTTGAAGGATCCTGTTGCACAGGAGGTCTTTCACCTCCAAAAATTTTCTTCTTTTTGATGGATCACTAAATAAAAAAGTTAAGCTTAATTTGGGACAGAAGTAACACTTAAGGCGTTTGGTGGACTTGGAATGTTAATATTAATAACATTTGCAAAGCTTGTAAACTTACTTTATTTTTAAGGACTACCTTTAGTGACAGTCTTAGGCCATTGGTGGAGACTCAAAGGCTGCCAAACTTGAGACCATGGAGGTCCAAAGTGCTCCATTGTCTGAAAAAAGCTCAAAATGTGCTTTGCGTATATTCTTCAATAATGCAATGCTGAATCTCTCGAGCAATCTTCTTACTGCCACCAAAGATGGAAAAGCTACACTTTCCCTATCTTGTGCAAAATATCTTGTTATTGGGTGAAGAGAAATGGTACTATGGTATGTATGGGTATGGTTTAAACATTAGTAGTTCAAGTTATCTTGCTTTTTTTGGCAATGAATTTATAGTGGGGTTAATATAGCAGTTAAGCTTCTCAAACAAGGCTTTGCTTGTGATAAAAATTTGTAAACTTTGTGGAGATTAAAAATTTTGCGGTATTTACTTTCTTACTTGCTCTTTCTCTTTTGGCCTTATAAGAAGTCTAAAGTATTTGGACTTTAGCACACCACTCCATATTTTCTTTCTAATTCCGCTCTAGTTTCTGGAGTGGTGTGCTAAAGTTAAATATAAAAAGAAAAAGAATGATTTCTTACTACTTGCAAGCATTACATTCTGCGATCTGTGGCTAGAATGGAATATATAGATATTTTCTTTTAAAATAGCTTGTGGTTCTATTGTGAAAAGGCTTATTTGGAGCAGTATTTTTATATCTTAAAAAGAAATGCTACTTAATAATCATAGGCTTGTCAACTTGTCTAAATGTGTATCTATTGCTTCT

Network for GWHGAAEX005199

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05282.10	AAR2	45	376	3.20E-83

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.020
SRP064423	SRR2545915	Juvenile tuber	18.240
SRP108465	SRR5643513	five period of Gastrodia elata	4.020
	SRR5643514	five period of Gastrodia elata	4.120
	SRR5643515	five period of Gastrodia elata	4.180
	SRR5643524	five period of Gastrodia elata	4.220
	SRR5643525	five period of Gastrodia elata	4.000
	SRR5643528	five period of Gastrodia elata	3.210
	SRR5643658	five period of Gastrodia elata	5.100
	SRR5643659	five period of Gastrodia elata	4.450
	SRR5643660	five period of Gastrodia elata	4.830
	SRR5643661	five period of Gastrodia elata	4.310
	SRR5643662	five period of Gastrodia elata	3.320
	SRR5643663	five period of Gastrodia elata	4.670
	SRR5643664	five period of Gastrodia elata	4.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.600
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.040
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.570
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.460
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.680
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.620
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.550
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.020
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.550
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.980
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.310
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.310
SRP279888	Gastro	Gastrodia elata tuber	9.76
	Juven	Juvenile tuber	9.81
	Mother_Gastro	Mother tuber of Gastrodia elata	4.19
	Mother_Juven	Mother tuber of Juvenile	8.89